Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.67□□□□□ -1.66
SUMO3P55854 AL035410.1-201ENST00000427409 427 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 RPL37P21-201ENST00000435890 276 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 LSM1P1-201ENST00000438629 273 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.67□□□□□ -1.66
SUMO3P55854 RPL5P25-201ENST00000441148 775 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AL163193.1-201ENST00000444895 788 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.67□□□□□ -1.66
SUMO3P55854 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.67□□□□□ -1.66
SUMO3P55854 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.67□□□□□ -1.66
SUMO3P55854 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.67□□□□□ -1.66
SUMO3P55854 RPL7P31-201ENST00000450192 724 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 IGHV5-78-201ENST00000450948 295 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.67□□□□□ -1.66
SUMO3P55854 AL445669.2-201ENST00000454425 421 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.67□□□□□ -1.66
SUMO3P55854 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 RPL37P6-202ENST00000464216 403 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AC090602.1-201ENST00000469695 252 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 RN7SL222P-201ENST00000476452 299 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.67□□□□□ -1.66
SUMO3P55854 AC006499.3-201ENST00000506077 748 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 CBX3P3-201ENST00000508108 532 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.67□□□□□ -1.66
SUMO3P55854 AC116347.2-201ENST00000514912 523 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 RNA5SP34-201ENST00000516887 130 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 IGLVIV-53-201ENST00000520107 367 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 AC100784.1-201ENST00000522790 310 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.67□□□□□ -1.66
SUMO3P55854 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SUMO3P55854 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.67□□□□□ -1.66
SUMO3P55854 OR5BC1P-201ENST00000529327 739 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.67□□□□□ -1.66
SUMO3P55854 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.67□□□□□ -1.66
SUMO3P55854 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.67□□□□□ -1.66
SUMO3P55854 RN7SL753P-201ENST00000581238 290 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 OR4G1P-201ENST00000588632 938 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.67□□□□□ -1.66
SUMO3P55854 AC012065.4-201ENST00000602445 679 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AP005432.2-201ENST00000608162 586 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.67□□□□□ -1.66
SUMO3P55854 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SUMO3P55854 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SUMO3P55854 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SUMO3P55854 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 AL049555.1-201ENST00000562834 1933 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SUMO3P55854 EIF2AP4-201ENST00000424793 1781 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SUMO3P55854 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.67□□□□□ -1.66
SUMO3P55854 MAPK10-338ENST00000641647 3362 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SUMO3P55854 PCAT14-202ENST00000627127 3935 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 AC004817.4-201ENST00000602396 3625 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.66□□□□□ -1.66
SUMO3P55854 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SUMO3P55854 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SUMO3P55854 AC104118.1-201ENST00000607625 1589 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SUMO3P55854 AC092104.1-201ENST00000497346 1441 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 AC097714.1-201ENST00000511272 1647 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SUMO3P55854 RNU5F-7P-201ENST00000363696 115 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 RNU6-777P-201ENST00000364265 104 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 RPL31P1-201ENST00000398116 372 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 AL035079.1-201ENST00000405210 287 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 U3.36-201ENST00000408418 213 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 RN7SKP114-201ENST00000410327 279 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 RN7SKP247-201ENST00000411094 308 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 RPL17P12-201ENST00000413391 526 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 AC109780.2-201ENST00000413467 845 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 AC007738.1-201ENST00000413892 348 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.66□□□□□ -1.66
SUMO3P55854 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.66□□□□□ -1.66
SUMO3P55854 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.66□□□□□ -1.66
SUMO3P55854 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.66□□□□□ -1.66
SUMO3P55854 RPS27AP7-201ENST00000422792 455 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.66□□□□□ -1.66
SUMO3P55854 AL139148.1-201ENST00000427122 680 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.66□□□□□ -1.66
SUMO3P55854 DLGAP5P1-201ENST00000430307 464 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.66□□□□□ -1.66
SUMO3P55854 AL450263.2-201ENST00000439400 589 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.66□□□□□ -1.66
SUMO3P55854 AL592447.1-201ENST00000447592 540 ntBASIC4.66□□□□□ -1.66
SUMO3P55854 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.66□□□□□ -1.66
SUMO3P55854 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.66□□□□□ -1.66
SUMO3P55854 AC108161.1-201ENST00000461060 402 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms