Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.95□□□□□ -1.62
COPAP53621 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.95□□□□□ -1.62
COPAP53621 AC138915.2-201ENST00000569776 97 ntBASIC4.95□□□□□ -1.62
COPAP53621 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.95□□□□□ -1.62
COPAP53621 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.95□□□□□ -1.62
COPAP53621 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.95□□□□□ -1.62
COPAP53621 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.95□□□□□ -1.62
COPAP53621 RNF138P2-201ENST00000603490 592 ntBASIC4.95□□□□□ -1.62
COPAP53621 AC106791.2-201ENST00000604680 391 ntBASIC4.95□□□□□ -1.62
COPAP53621 SNORD91B-202ENST00000608459 222 ntBASIC4.95□□□□□ -1.62
COPAP53621 AC097505.1-201ENST00000610199 565 ntBASIC4.95□□□□□ -1.62
COPAP53621 AC010608.2-201ENST00000624830 470 ntBASIC4.95□□□□□ -1.62
COPAP53621 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.95□□□□□ -1.62
COPAP53621 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
COPAP53621 LINC01355-201ENST00000566551 5444 ntBASIC4.94□□□□□ -1.62
COPAP53621 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
COPAP53621 SCN1A-220ENST00000641603 12506 ntBASIC4.94□□□□□ -1.62
COPAP53621 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.94□□□□□ -1.62
COPAP53621 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COPAP53621 Y_RNA.311-201ENST00000365068 96 ntBASIC4.94□□□□□ -1.62
COPAP53621 SUGT1P1-201ENST00000379514 476 ntBASIC4.94□□□□□ -1.62
COPAP53621 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COPAP53621 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.94□□□□□ -1.62
COPAP53621 RSU1P3-201ENST00000412878 835 ntBASIC4.94□□□□□ -1.62
COPAP53621 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.94□□□□□ -1.62
COPAP53621 FCF1P2-201ENST00000415284 583 ntBASIC4.94□□□□□ -1.62
COPAP53621 TBCAP2-201ENST00000416175 326 ntBASIC4.94□□□□□ -1.62
COPAP53621 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.94□□□□□ -1.62
COPAP53621 BX510359.2-201ENST00000417920 305 ntBASIC4.94□□□□□ -1.62
COPAP53621 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.94□□□□□ -1.62
COPAP53621 MTCO3P1-205ENST00000422088 832 ntBASIC4.94□□□□□ -1.62
COPAP53621 AL390023.1-201ENST00000428836 262 ntBASIC4.94□□□□□ -1.62
COPAP53621 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.94□□□□□ -1.62
COPAP53621 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.94□□□□□ -1.62
COPAP53621 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.94□□□□□ -1.62
COPAP53621 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.94□□□□□ -1.62
COPAP53621 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.94□□□□□ -1.62
COPAP53621 AC000111.2-201ENST00000448200 210 ntBASIC4.94□□□□□ -1.62
COPAP53621 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.94□□□□□ -1.62
COPAP53621 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.94□□□□□ -1.62
COPAP53621 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.94□□□□□ -1.62
COPAP53621 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
COPAP53621 AC083829.1-201ENST00000503756 657 ntBASIC4.94□□□□□ -1.62
COPAP53621 RN7SKP31-201ENST00000516354 278 ntBASIC4.94□□□□□ -1.62
COPAP53621 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.94□□□□□ -1.62
COPAP53621 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.94□□□□□ -1.62
COPAP53621 AC022882.1-201ENST00000532142 501 ntBASIC4.94□□□□□ -1.62
COPAP53621 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.94□□□□□ -1.62
COPAP53621 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.94□□□□□ -1.62
COPAP53621 AC005868.1-201ENST00000536421 331 ntBASIC4.94□□□□□ -1.62
COPAP53621 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.94□□□□□ -1.62
COPAP53621 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.94□□□□□ -1.62
COPAP53621 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.94□□□□□ -1.62
COPAP53621 AL161713.1-201ENST00000555538 145 ntBASIC4.94□□□□□ -1.62
COPAP53621 AC116553.2-201ENST00000564203 463 ntBASIC4.94□□□□□ -1.62
COPAP53621 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.94□□□□□ -1.62
COPAP53621 CYCSP40-201ENST00000575927 294 ntBASIC4.94□□□□□ -1.62
COPAP53621 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.94□□□□□ -1.62
COPAP53621 AC093765.1-201ENST00000603758 881 ntBASIC4.94□□□□□ -1.62
COPAP53621 AC007497.1-201ENST00000610421 561 ntBASIC4.94□□□□□ -1.62
COPAP53621 AL139418.1-201ENST00000613613 177 ntBASIC4.94□□□□□ -1.62
COPAP53621 AL392048.1-201ENST00000613946 534 ntBASIC4.94□□□□□ -1.62
COPAP53621 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COPAP53621 AC243756.2-201ENST00000618406 463 ntBASIC4.94□□□□□ -1.62
COPAP53621 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COPAP53621 AC019206.1-201ENST00000621938 425 ntBASIC4.94□□□□□ -1.62
COPAP53621 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COPAP53621 AL359757.1-201ENST00000623176 255 ntBASIC4.94□□□□□ -1.62
COPAP53621 MKKS-204ENST00000639674 192 ntBASIC4.94□□□□□ -1.62
COPAP53621 AC010928.1-201ENST00000592477 1447 ntBASIC4.94□□□□□ -1.62
COPAP53621 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.94□□□□□ -1.62
COPAP53621 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COPAP53621 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COPAP53621 MAPK10-320ENST00000641462 6696 ntBASIC4.94□□□□□ -1.62
COPAP53621 AL136964.1-201ENST00000622038 2990 ntBASIC4.94□□□□□ -1.62
COPAP53621 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COPAP53621 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
COPAP53621 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COPAP53621 AC107982.1-201ENST00000507171 1300 ntBASIC4.94□□□□□ -1.62
COPAP53621 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.94□□□□□ -1.62
COPAP53621 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
COPAP53621 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
COPAP53621 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.94□□□□□ -1.62
COPAP53621 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COPAP53621 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.94□□□□□ -1.62
COPAP53621 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
COPAP53621 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COPAP53621 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.93□□□□□ -1.62
COPAP53621 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COPAP53621 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COPAP53621 RNU6-444P-201ENST00000383988 108 ntBASIC4.93□□□□□ -1.62
COPAP53621 U3.30-201ENST00000391308 210 ntBASIC4.93□□□□□ -1.62
COPAP53621 GLULP6-201ENST00000399502 913 ntBASIC4.93□□□□□ -1.62
COPAP53621 AL590084.2-201ENST00000401481 382 ntBASIC4.93□□□□□ -1.62
COPAP53621 AL357515.1-201ENST00000402967 542 ntBASIC4.93□□□□□ -1.62
COPAP53621 AP000580.1-201ENST00000404439 358 ntBASIC4.93□□□□□ -1.62
COPAP53621 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COPAP53621 AC098592.1-201ENST00000419352 333 ntBASIC4.93□□□□□ -1.62
COPAP53621 AC069213.2-201ENST00000420238 366 ntBASIC4.93□□□□□ -1.62
COPAP53621 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms