Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC234064.1-201ENST00000436312 247 ntBASIC5.68□□□□□ -1.5
MRE11P49959 Z74696.2-201ENST00000436514 498 ntBASIC5.68□□□□□ -1.5
MRE11P49959 MTATP6P23-201ENST00000440153 476 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC092641.1-201ENST00000440229 772 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AL357520.1-201ENST00000441557 453 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AL691482.1-201ENST00000453255 87 ntBASIC5.68□□□□□ -1.5
MRE11P49959 RNU6-956P-201ENST00000458868 103 ntBASIC5.68□□□□□ -1.5
MRE11P49959 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
MRE11P49959 WBP1LP4-201ENST00000505043 344 ntBASIC5.68□□□□□ -1.5
MRE11P49959 CBX3P3-201ENST00000508108 532 ntBASIC5.68□□□□□ -1.5
MRE11P49959 HSPE1P23-201ENST00000509838 286 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC079140.3-201ENST00000511111 550 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC010587.2-201ENST00000511727 448 ntBASIC5.68□□□□□ -1.5
MRE11P49959 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.68□□□□□ -1.5
MRE11P49959 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.68□□□□□ -1.5
MRE11P49959 MTND4LP26-201ENST00000518144 282 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.68□□□□□ -1.5
MRE11P49959 OR5G4P-201ENST00000525251 760 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.68□□□□□ -1.5
MRE11P49959 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.68□□□□□ -1.5
MRE11P49959 CYCSP28-201ENST00000534284 321 ntBASIC5.68□□□□□ -1.5
MRE11P49959 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.68□□□□□ -1.5
MRE11P49959 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.68□□□□□ -1.5
MRE11P49959 AC092747.2-201ENST00000545069 983 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.68□□□□□ -1.5
MRE11P49959 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.68□□□□□ -1.5
MRE11P49959 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MRE11P49959 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MRE11P49959 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.68□□□□□ -1.5
MRE11P49959 SLC25A36P1-201ENST00000590111 465 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC018714.1-201ENST00000605028 208 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AL513477.2-201ENST00000607858 568 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC087241.4-201ENST00000612441 480 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC008083.4-201ENST00000615076 444 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC243756.2-201ENST00000618406 463 ntBASIC5.68□□□□□ -1.5
MRE11P49959 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
MRE11P49959 AC068137.3-201ENST00000639191 341 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC073869.6-201ENST00000640656 341 ntBASIC5.68□□□□□ -1.5
MRE11P49959 AC095050.2-201ENST00000510748 1458 ntBASIC5.68□□□□□ -1.5
MRE11P49959 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.68□□□□□ -1.5
MRE11P49959 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MRE11P49959 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.68□□□□□ -1.5
MRE11P49959 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.67□□□□□ -1.5
MRE11P49959 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
MRE11P49959 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MRE11P49959 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.67□□□□□ -1.5
MRE11P49959 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
MRE11P49959 AL672167.1-206ENST00000356293 943 ntBASIC5.67□□□□□ -1.5
MRE11P49959 Y_RNA.6-201ENST00000362350 114 ntBASIC5.67□□□□□ -1.5
MRE11P49959 U3.4-201ENST00000363352 213 ntBASIC5.67□□□□□ -1.5
MRE11P49959 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.67□□□□□ -1.5
MRE11P49959 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.67□□□□□ -1.5
MRE11P49959 RNU2-50P-201ENST00000410494 143 ntBASIC5.67□□□□□ -1.5
MRE11P49959 RN7SKP142-201ENST00000411236 328 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AC013404.1-201ENST00000413068 249 ntBASIC5.67□□□□□ -1.5
MRE11P49959 MTND1P23-201ENST00000416931 372 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AL022400.1-201ENST00000423946 935 ntBASIC5.67□□□□□ -1.5
MRE11P49959 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.67□□□□□ -1.5
MRE11P49959 DPRXP1-201ENST00000426312 460 ntBASIC5.67□□□□□ -1.5
MRE11P49959 MTCO1P3-201ENST00000429327 192 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.67□□□□□ -1.5
MRE11P49959 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.67□□□□□ -1.5
MRE11P49959 USP9YP31-201ENST00000431405 881 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.67□□□□□ -1.5
MRE11P49959 AL590103.1-201ENST00000434488 307 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AC093414.1-201ENST00000434712 514 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AL591623.2-201ENST00000449978 222 ntBASIC5.67□□□□□ -1.5
MRE11P49959 RPS7P7-201ENST00000463499 571 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AC037198.2-201ENST00000478845 733 ntBASIC5.67□□□□□ -1.5
MRE11P49959 RPL23AP72-201ENST00000492447 435 ntBASIC5.67□□□□□ -1.5
MRE11P49959 RN7SL558P-201ENST00000497468 299 ntBASIC5.67□□□□□ -1.5
MRE11P49959 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MRE11P49959 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MRE11P49959 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.67□□□□□ -1.5
MRE11P49959 RNU6-678P-201ENST00000516832 109 ntBASIC5.67□□□□□ -1.5
MRE11P49959 RNA5SP392-201ENST00000516905 112 ntBASIC5.67□□□□□ -1.5
MRE11P49959 RN7SKP99-201ENST00000517028 307 ntBASIC5.67□□□□□ -1.5
MRE11P49959 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.67□□□□□ -1.5
MRE11P49959 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
MRE11P49959 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MRE11P49959 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.67□□□□□ -1.5
MRE11P49959 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
MRE11P49959 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.67□□□□□ -1.5
MRE11P49959 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.67□□□□□ -1.5
MRE11P49959 AC007954.1-201ENST00000554198 494 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AC087477.6-201ENST00000559595 843 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AC012435.1-202ENST00000568772 240 ntBASIC5.67□□□□□ -1.5
MRE11P49959 MIR5096-201ENST00000583713 70 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AC090181.2-201ENST00000602975 672 ntBASIC5.67□□□□□ -1.5
MRE11P49959 U73023.1-201ENST00000603134 700 ntBASIC5.67□□□□□ -1.5
MRE11P49959 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.67□□□□□ -1.5
MRE11P49959 COX6CP4-201ENST00000605798 228 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AC100793.4-201ENST00000613683 429 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.67□□□□□ -1.5
MRE11P49959 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.67□□□□□ -1.5
MRE11P49959 AC025588.4-201ENST00000615802 908 ntBASIC5.67□□□□□ -1.5
MRE11P49959 U6atac.1-201ENST00000616025 117 ntBASIC5.67□□□□□ -1.5
MRE11P49959 AF001550.2-201ENST00000636643 217 ntBASIC5.67□□□□□ -1.5
MRE11P49959 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
MRE11P49959 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms