Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.15□□□□□ -1.59
TM4SF4P48230 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TM4SF4P48230 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.15□□□□□ -1.59
TM4SF4P48230 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.15□□□□□ -1.59
TM4SF4P48230 WBP1LP4-201ENST00000505043 344 ntBASIC5.15□□□□□ -1.59
TM4SF4P48230 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.15□□□□□ -1.59
TM4SF4P48230 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.15□□□□□ -1.59
TM4SF4P48230 SNORD116-26-201ENST00000516006 96 ntBASIC5.15□□□□□ -1.59
TM4SF4P48230 RNA5SP49-201ENST00000516450 115 ntBASIC5.15□□□□□ -1.59
TM4SF4P48230 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.15□□□□□ -1.59
TM4SF4P48230 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
TM4SF4P48230 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.15□□□□□ -1.59
TM4SF4P48230 MTND3P12-201ENST00000559068 328 ntBASIC5.15□□□□□ -1.59
TM4SF4P48230 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.15□□□□□ -1.59
TM4SF4P48230 AC091304.6-201ENST00000619761 202 ntBASIC5.15□□□□□ -1.59
TM4SF4P48230 RNU6-156P-201ENST00000621869 107 ntBASIC5.15□□□□□ -1.59
TM4SF4P48230 AC079416.3-201ENST00000624479 549 ntBASIC5.15□□□□□ -1.59
TM4SF4P48230 LINC00622-201ENST00000562811 1570 ntBASIC5.15□□□□□ -1.59
TM4SF4P48230 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TM4SF4P48230 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
TM4SF4P48230 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TM4SF4P48230 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
TM4SF4P48230 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
TM4SF4P48230 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.15□□□□□ -1.59
TM4SF4P48230 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.15□□□□□ -1.59
TM4SF4P48230 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TM4SF4P48230 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.14□□□□□ -1.59
TM4SF4P48230 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.14□□□□□ -1.59
TM4SF4P48230 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM4SF4P48230 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM4SF4P48230 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TM4SF4P48230 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM4SF4P48230 Y_RNA.25-201ENST00000362528 102 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TM4SF4P48230 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
TM4SF4P48230 RN7SKP247-201ENST00000411094 308 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 OR8F1P-201ENST00000425243 930 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.14□□□□□ -1.59
TM4SF4P48230 USP9YP11-201ENST00000427537 717 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 ATP5F1P1-201ENST00000433775 569 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 RPS29P7-201ENST00000439662 171 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 FGF7P5-201ENST00000441829 291 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.14□□□□□ -1.59
TM4SF4P48230 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.14□□□□□ -1.59
TM4SF4P48230 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.14□□□□□ -1.59
TM4SF4P48230 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.14□□□□□ -1.59
TM4SF4P48230 AL133547.1-201ENST00000448546 220 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 MTND1P31-201ENST00000449206 961 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 HMGB3P21-201ENST00000452483 547 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 IFNWP4-201ENST00000453148 294 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.14□□□□□ -1.59
TM4SF4P48230 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.14□□□□□ -1.59
TM4SF4P48230 AC010301.1-201ENST00000473936 355 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 GAPDHP36-201ENST00000480688 918 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 AC010460.1-201ENST00000507087 466 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 MTATP6P22-201ENST00000507369 598 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.14□□□□□ -1.59
TM4SF4P48230 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.14□□□□□ -1.59
TM4SF4P48230 AC027309.2-201ENST00000520566 192 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 IFITM8P-201ENST00000522529 394 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 MTND2P38-201ENST00000522536 667 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.14□□□□□ -1.59
TM4SF4P48230 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.14□□□□□ -1.59
TM4SF4P48230 AL121834.1-201ENST00000572284 509 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 OR4K7P-201ENST00000580232 945 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.14□□□□□ -1.59
TM4SF4P48230 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.14□□□□□ -1.59
TM4SF4P48230 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.14□□□□□ -1.59
TM4SF4P48230 AL161729.3-201ENST00000603533 673 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 AC133552.5-201ENST00000604266 540 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 Z99289.3-201ENST00000605586 594 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 RNU4-89P-201ENST00000607443 133 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 AP002791.1-201ENST00000623291 381 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 AL356121.2-201ENST00000624715 780 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 MKKS-204ENST00000639674 192 ntBASIC5.14□□□□□ -1.59
TM4SF4P48230 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM4SF4P48230 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.14□□□□□ -1.59
TM4SF4P48230 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TM4SF4P48230 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TM4SF4P48230 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TM4SF4P48230 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TM4SF4P48230 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TM4SF4P48230 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM4SF4P48230 CDR1-202ENST00000625883 1485 ntBASIC5.13□□□□□ -1.59
TM4SF4P48230 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TM4SF4P48230 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TM4SF4P48230 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
TM4SF4P48230 AC140134.1-201ENST00000511830 3544 ntBASIC5.13□□□□□ -1.59
TM4SF4P48230 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM4SF4P48230 MTND5P28-201ENST00000438005 1594 ntBASIC5.13□□□□□ -1.59
TM4SF4P48230 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
TM4SF4P48230 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.13□□□□□ -1.59
TM4SF4P48230 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.13□□□□□ -1.59
TM4SF4P48230 RNA5SP130-201ENST00000364431 114 ntBASIC5.13□□□□□ -1.59
TM4SF4P48230 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.13□□□□□ -1.59
TM4SF4P48230 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TM4SF4P48230 UBBP2-201ENST00000376781 231 ntBASIC5.13□□□□□ -1.59
TM4SF4P48230 SNORA9-201ENST00000384215 133 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms