Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AL133244.1-201ENST00000456007 258 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 SNORA84-201ENST00000459229 133 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.34□□□□□ -1.71
NEDD4P46934 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.34□□□□□ -1.71
NEDD4P46934 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD4P46934 RNU1-95P-201ENST00000516357 160 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 RNU6-1004P-201ENST00000516584 111 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 RNU1-128P-201ENST00000516704 160 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD4P46934 AC090281.1-201ENST00000523019 276 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.34□□□□□ -1.71
NEDD4P46934 NPM1P35-201ENST00000533043 868 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 AC023161.2-201ENST00000551218 780 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.34□□□□□ -1.71
NEDD4P46934 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.34□□□□□ -1.71
NEDD4P46934 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.34□□□□□ -1.71
NEDD4P46934 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NEDD4P46934 ABI1P1-201ENST00000603375 1120 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 AC144521.1-201ENST00000607148 956 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 AL391497.1-201ENST00000608671 547 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.34□□□□□ -1.71
NEDD4P46934 AC011472.4-201ENST00000615848 491 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 AC018926.1-201ENST00000616335 435 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 AC068880.4-201ENST00000623082 495 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.34□□□□□ -1.71
NEDD4P46934 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.34□□□□□ -1.71
NEDD4P46934 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NEDD4P46934 AC007823.1-201ENST00000569932 1566 ntBASIC4.34□□□□□ -1.71
NEDD4P46934 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
NEDD4P46934 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NEDD4P46934 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NEDD4P46934 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.34□□□□□ -1.72
NEDD4P46934 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NEDD4P46934 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD4P46934 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD4P46934 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD4P46934 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD4P46934 AL031985.3-201ENST00000565390 2449 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD4P46934 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NEDD4P46934 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD4P46934 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD4P46934 AL035405.1-201ENST00000400795 710 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 HSPE1P8-201ENST00000406997 288 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NEDD4P46934 ATP5A1P2-201ENST00000412323 255 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD4P46934 AL035423.1-201ENST00000420331 213 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 VN1R42P-201ENST00000424651 344 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 MOB1AP1-201ENST00000430903 535 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 AL035458.1-201ENST00000433096 585 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD4P46934 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD4P46934 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.33□□□□□ -1.72
NEDD4P46934 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD4P46934 AC112518.2-201ENST00000508565 425 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD4P46934 AC121161.1-201ENST00000510606 652 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD4P46934 MIR2114-201ENST00000516645 80 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 SNORA70.18-201ENST00000516696 98 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 RN7SKP209-201ENST00000516888 304 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD4P46934 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
NEDD4P46934 C1DP5-201ENST00000525775 383 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.33□□□□□ -1.72
NEDD4P46934 AC092747.2-201ENST00000545069 983 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.33□□□□□ -1.72
NEDD4P46934 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD4P46934 AC006116.7-201ENST00000590141 756 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.33□□□□□ -1.72
NEDD4P46934 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD4P46934 CR381670.1-201ENST00000624291 1693 ntBASIC4.33□□□□□ -1.72
NEDD4P46934 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NEDD4P46934 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NEDD4P46934 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD4P46934 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD4P46934 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD4P46934 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD4P46934 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD4P46934 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NEDD4P46934 RNU4-27P-201ENST00000410889 139 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC105402.1-201ENST00000413336 545 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD4P46934 DPY19L1P2-201ENST00000426647 915 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD4P46934 RPL6P5-201ENST00000445678 828 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 FGF7P3-201ENST00000454645 303 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 APOOP2-201ENST00000461561 539 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC104619.4-201ENST00000510773 249 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 RNU6-334P-201ENST00000517072 102 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AP003102.1-201ENST00000525638 661 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NEDD4P46934 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.32□□□□□ -1.72
NEDD4P46934 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.32□□□□□ -1.72
NEDD4P46934 AL121576.1-201ENST00000556055 276 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 TRAV15-201ENST00000556680 249 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.32□□□□□ -1.72
NEDD4P46934 AL109741.3-201ENST00000561748 592 ntBASIC4.32□□□□□ -1.72
NEDD4P46934 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms