Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AL590399.6-201ENST00000446396 307 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC13P31276 RN7SL132P-201ENST00000478131 296 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AC012158.1-204ENST00000483430 465 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AC104164.2-201ENST00000496953 495 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AC016550.1-201ENST00000505348 785 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 ATP1B1P1-201ENST00000509767 915 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AC108064.1-201ENST00000513791 460 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 MTND4LP31-201ENST00000514859 294 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 HMGB1P1-201ENST00000522557 636 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC13P31276 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC13P31276 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC13P31276 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC13P31276 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC13P31276 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC13P31276 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC13P31276 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC13P31276 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC13P31276 AC007687.1-201ENST00000602704 304 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC13P31276 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC13P31276 AC016597.2-201ENST00000613256 341 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HOXC13P31276 AC253576.2-201ENST00000618815 580 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 RNU6-156P-201ENST00000621869 107 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AL356121.2-201ENST00000624715 780 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 AL592494.2-201ENST00000425455 1548 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HOXC13P31276 SAGE4P-201ENST00000442271 3381 ntBASIC4.5□□□□□ -1.69
HOXC13P31276 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HOXC13P31276 KPNA2P2-201ENST00000419546 1489 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC13P31276 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC13P31276 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC13P31276 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC13P31276 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC13P31276 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HOXC13P31276 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC13P31276 SNORA71.3-201ENST00000362582 128 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC13P31276 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC13P31276 PPIAP31-201ENST00000405422 495 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 RPS20P14-201ENST00000412545 360 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC13P31276 AL356095.1-201ENST00000417217 199 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC13P31276 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC13P31276 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXC13P31276 AL158053.1-201ENST00000441503 453 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 RPS26P56-201ENST00000444468 240 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 Z77249.1-201ENST00000444622 1175 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 MTCYBP11-201ENST00000447254 1109 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 HMGN2P21-201ENST00000447764 270 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 AC233982.1-201ENST00000451247 436 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC13P31276 DNAJC19P8-201ENST00000452887 259 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
HOXC13P31276 HPRT1P2-201ENST00000505250 544 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC13P31276 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC13P31276 OR5BC1P-201ENST00000529327 739 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 AC100770.1-201ENST00000532310 322 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC13P31276 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC13P31276 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXC13P31276 AC090616.5-202ENST00000582111 297 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC13P31276 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC13P31276 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC13P31276 BNIP3P40-201ENST00000596017 556 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
HOXC13P31276 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 MIR6875-201ENST00000617506 72 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 AP000770.2-201ENST00000623694 100 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 AC009039.2-201ENST00000624524 529 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 AC092608.3-201ENST00000625017 386 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 AC140479.6-201ENST00000633535 357 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 FP325313.1-201ENST00000638228 703 ntBASIC4.49□□□□□ -1.69
HOXC13P31276 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC13P31276 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC13P31276 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
HOXC13P31276 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC13P31276 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC13P31276 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HOXC13P31276 MTND5P28-201ENST00000438005 1594 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 SEPT7P7-201ENST00000420492 1301 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC13P31276 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXC13P31276 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC13P31276 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.48□□□□□ -1.69
HOXC13P31276 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HOXC13P31276 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HOXC13P31276 SNORA31-201ENST00000362607 130 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 SNORA63.3-201ENST00000362682 132 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HOXC13P31276 MIR1911-201ENST00000410783 80 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 AC009237.10-201ENST00000414112 510 ntBASIC4.48□□□□□ -1.69
HOXC13P31276 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms