Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXA6P31267 HSPD1P15-201ENST00000505573 1122 ntBASIC3.81□□□□□ -1.8
HOXA6P31267 AC026784.1-201ENST00000507986 352 ntBASIC3.81□□□□□ -1.8
HOXA6P31267 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXA6P31267 GTF2IP8-201ENST00000560687 584 ntBASIC3.81□□□□□ -1.8
HOXA6P31267 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.81□□□□□ -1.8
HOXA6P31267 LLPHP1-201ENST00000603571 367 ntBASIC3.81□□□□□ -1.8
HOXA6P31267 uc_338.9-201ENST00000617424 182 ntBASIC3.81□□□□□ -1.8
HOXA6P31267 AC018555.1-201ENST00000567548 1980 ntBASIC3.81□□□□□ -1.8
HOXA6P31267 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HOXA6P31267 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HOXA6P31267 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA6P31267 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA6P31267 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA6P31267 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXA6P31267 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA6P31267 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXA6P31267 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
HOXA6P31267 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
HOXA6P31267 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXA6P31267 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA6P31267 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HOXA6P31267 VN1R8P-201ENST00000407739 893 ntBASIC3.8□□□□□ -1.8
HOXA6P31267 RNU2-37P-201ENST00000410695 177 ntBASIC3.8□□□□□ -1.8
HOXA6P31267 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXA6P31267 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXA6P31267 RPS7P5-201ENST00000441482 581 ntBASIC3.8□□□□□ -1.8
HOXA6P31267 RBMY2UP-201ENST00000453474 324 ntBASIC3.8□□□□□ -1.8
HOXA6P31267 AC006517.1-201ENST00000480485 328 ntBASIC3.8□□□□□ -1.8
HOXA6P31267 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXA6P31267 AC100770.1-201ENST00000532310 322 ntBASIC3.8□□□□□ -1.8
HOXA6P31267 AL034351.1-201ENST00000605288 668 ntBASIC3.8□□□□□ -1.8
HOXA6P31267 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXA6P31267 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXA6P31267 AL035425.3-201ENST00000564206 4996 ntBASIC3.8□□□□□ -1.8
HOXA6P31267 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA6P31267 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA6P31267 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA6P31267 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXA6P31267 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
HOXA6P31267 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA6P31267 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA6P31267 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HOXA6P31267 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA6P31267 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA6P31267 AC067945.1-201ENST00000342609 618 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 HMGB1P13-201ENST00000406019 642 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA6P31267 RPS26P40-201ENST00000435209 294 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA6P31267 RANP8-201ENST00000444720 713 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 HMGB1P16-201ENST00000447155 540 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 SNRPGP3-201ENST00000469405 227 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 RN7SL330P-201ENST00000469709 307 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 RPL23AP71-201ENST00000470966 469 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 LARP7P4-201ENST00000481075 878 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA6P31267 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA6P31267 RN7SKP13-201ENST00000515933 244 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 RNU6-319P-201ENST00000516025 108 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 RN7SKP57-201ENST00000517248 293 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 RANP9-201ENST00000519957 271 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXA6P31267 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA6P31267 MIR5047-201ENST00000579212 100 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA6P31267 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA6P31267 AC018754.1-201ENST00000607486 925 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXA6P31267 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA6P31267 MIR8058-201ENST00000615737 89 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 AC243756.2-201ENST00000618406 463 ntBASIC3.79□□□□□ -1.8
HOXA6P31267 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA6P31267 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HOXA6P31267 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA6P31267 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA6P31267 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXA6P31267 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HOXA6P31267 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXA6P31267 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA6P31267 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA6P31267 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA6P31267 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA6P31267 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXA6P31267 RNA5SP50-201ENST00000363731 107 ntBASIC3.78□□□□□ -1.8
HOXA6P31267 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA6P31267 AC096664.2-201ENST00000411843 406 ntBASIC3.78□□□□□ -1.8
HOXA6P31267 AJ239321.1-201ENST00000424255 564 ntBASIC3.78□□□□□ -1.8
HOXA6P31267 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXA6P31267 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.78□□□□□ -1.8
HOXA6P31267 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA6P31267 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA6P31267 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA6P31267 HMGB1P21-201ENST00000502313 581 ntBASIC3.78□□□□□ -1.8
HOXA6P31267 AC108941.1-201ENST00000502853 530 ntBASIC3.78□□□□□ -1.8
HOXA6P31267 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXA6P31267 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXA6P31267 AC124068.1-201ENST00000563131 678 ntBASIC3.78□□□□□ -1.8
HOXA6P31267 MIR4298-201ENST00000584380 73 ntBASIC3.78□□□□□ -1.8
HOXA6P31267 AL354760.1-201ENST00000608357 643 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms