Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 MIR23B-201ENST00000384832 97 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 AL391417.1-201ENST00000404100 426 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 MTHFD2P2-201ENST00000407725 247 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 RNU6ATAC-201ENST00000408749 126 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 RN7SKP285-201ENST00000410137 318 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 HIGD1AP12-201ENST00000427832 281 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 MOB1AP1-201ENST00000430903 535 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DMBP28068 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 UBE2V2P1-201ENST00000434717 398 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 AC044797.1-201ENST00000445744 679 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 VN1R48P-201ENST00000448149 1036 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 RN7SL542P-201ENST00000467147 294 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 RPL21P129-201ENST00000491732 478 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 CDH12P2-201ENST00000504393 298 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DMBP28068 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DMBP28068 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DMBP28068 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 AC006254.3-201ENST00000603353 884 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 AC117490.2-201ENST00000610042 594 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DMBP28068 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 AC116563.2-201ENST00000624751 535 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 AF001550.2-201ENST00000636643 217 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 MIR7153-201ENST00000637758 57 ntBASIC2.83□□□□□ -1.96
HLA-DMBP28068 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DMBP28068 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
HLA-DMBP28068 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DMBP28068 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
HLA-DMBP28068 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMBP28068 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMBP28068 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMBP28068 RNU6-666P-201ENST00000363499 107 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 RNU6-213P-201ENST00000384051 104 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMBP28068 HMGB3P20-201ENST00000417997 600 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC092832.1-201ENST00000422934 400 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC007389.2-201ENST00000434630 306 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 MTCO3P17-201ENST00000443775 513 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 AP000873.1-201ENST00000463987 400 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC007688.1-201ENST00000475592 759 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 RN7SL323P-201ENST00000494712 295 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 AL035404.1-201ENST00000497982 568 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 HMGB1P21-201ENST00000502313 581 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 OR5H4P-201ENST00000510851 923 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 TBCA-203ENST00000517679 545 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC025857.1-201ENST00000525252 377 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 CYCSP30-201ENST00000546447 172 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC025260.1-201ENST00000548858 430 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 TRAV15-201ENST00000556680 249 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 AC006946.3-201ENST00000609791 756 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 MIR8058-201ENST00000615737 89 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 AL590410.1-201ENST00000617925 333 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 FP236240.3-201ENST00000623061 327 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMBP28068 OTUD4P1-201ENST00000237841 3067 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMBP28068 DCAF13P3-201ENST00000561147 1334 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMBP28068 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMBP28068 PWAR6-201ENST00000552334 4618 ntBASIC2.82□□□□□ -1.96
HLA-DMBP28068 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
HLA-DMBP28068 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.82□□□□□ -1.96
HLA-DMBP28068 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DMBP28068 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DMBP28068 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HLA-DMBP28068 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DMBP28068 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
HLA-DMBP28068 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms