Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF3P18847 AL592148.2-201ENST00000612210 372 ntBASIC5.79□□□□□ -1.48
ATF3P18847 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.79□□□□□ -1.48
ATF3P18847 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.79□□□□□ -1.48
ATF3P18847 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.79□□□□□ -1.48
ATF3P18847 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATF3P18847 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATF3P18847 MAPK10-286ENST00000641208 8747 ntBASIC5.78□□□□□ -1.48
ATF3P18847 MAPK10-349ENST00000641767 3661 ntBASIC5.78□□□□□ -1.48
ATF3P18847 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ATF3P18847 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
ATF3P18847 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ATF3P18847 RNA5SP307-201ENST00000362863 116 ntBASIC5.78□□□□□ -1.48
ATF3P18847 RNA5SP72-201ENST00000364442 117 ntBASIC5.78□□□□□ -1.48
ATF3P18847 RNU6-146P-201ENST00000384602 108 ntBASIC5.78□□□□□ -1.48
ATF3P18847 NDUFB4P4-201ENST00000404822 243 ntBASIC5.78□□□□□ -1.48
ATF3P18847 RNU4-22P-201ENST00000411058 166 ntBASIC5.78□□□□□ -1.48
ATF3P18847 SNORA74C-2-201ENST00000411179 201 ntBASIC5.78□□□□□ -1.48
ATF3P18847 RNU6-575P-201ENST00000411326 105 ntBASIC5.78□□□□□ -1.48
ATF3P18847 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF3P18847 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.78□□□□□ -1.48
ATF3P18847 AL031736.2-201ENST00000426573 787 ntBASIC5.78□□□□□ -1.48
ATF3P18847 RAC1P8-201ENST00000427086 527 ntBASIC5.78□□□□□ -1.48
ATF3P18847 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF3P18847 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.78□□□□□ -1.48
ATF3P18847 ELOCP11-201ENST00000436690 332 ntBASIC5.78□□□□□ -1.48
ATF3P18847 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.78□□□□□ -1.48
ATF3P18847 VN1R25P-201ENST00000443385 738 ntBASIC5.78□□□□□ -1.48
ATF3P18847 ELOCP16-201ENST00000444494 332 ntBASIC5.78□□□□□ -1.48
ATF3P18847 MRPL42P4-201ENST00000453267 443 ntBASIC5.78□□□□□ -1.48
ATF3P18847 PTGES3P5-201ENST00000455109 434 ntBASIC5.78□□□□□ -1.48
ATF3P18847 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATF3P18847 RNU6-311P-201ENST00000516224 102 ntBASIC5.78□□□□□ -1.48
ATF3P18847 SOD1P3-201ENST00000518682 454 ntBASIC5.78□□□□□ -1.48
ATF3P18847 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATF3P18847 RPL21P12-201ENST00000559810 515 ntBASIC5.78□□□□□ -1.48
ATF3P18847 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF3P18847 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF3P18847 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.78□□□□□ -1.48
ATF3P18847 HMGB2P1-201ENST00000591146 634 ntBASIC5.78□□□□□ -1.48
ATF3P18847 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.78□□□□□ -1.48
ATF3P18847 AC091488.1-201ENST00000604239 660 ntBASIC5.78□□□□□ -1.48
ATF3P18847 Z98200.1-201ENST00000607298 470 ntBASIC5.78□□□□□ -1.48
ATF3P18847 AC009974.1-201ENST00000608881 455 ntBASIC5.78□□□□□ -1.48
ATF3P18847 AP005137.2-201ENST00000609238 400 ntBASIC5.78□□□□□ -1.48
ATF3P18847 AC007546.2-201ENST00000623996 360 ntBASIC5.78□□□□□ -1.48
ATF3P18847 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.78□□□□□ -1.48
ATF3P18847 AC087821.2-201ENST00000637086 450 ntBASIC5.78□□□□□ -1.48
ATF3P18847 MAPK10-304ENST00000641341 3984 ntBASIC5.78□□□□□ -1.48
ATF3P18847 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
ATF3P18847 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.78□□□□□ -1.48
ATF3P18847 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.78□□□□□ -1.48
ATF3P18847 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATF3P18847 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.78□□□□□ -1.48
ATF3P18847 ADAM24P-201ENST00000398655 2101 ntBASIC5.78□□□□□ -1.48
ATF3P18847 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ATF3P18847 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
ATF3P18847 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATF3P18847 AC000367.1-201ENST00000452711 1766 ntBASIC5.78□□□□□ -1.48
ATF3P18847 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATF3P18847 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ATF3P18847 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF3P18847 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
ATF3P18847 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATF3P18847 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ATF3P18847 AL450326.2-201ENST00000421913 1962 ntBASIC5.77□□□□□ -1.49
ATF3P18847 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ATF3P18847 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ATF3P18847 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
ATF3P18847 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATF3P18847 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ATF3P18847 RNU4-68P-201ENST00000364314 141 ntBASIC5.77□□□□□ -1.49
ATF3P18847 RNU6-619P-201ENST00000365146 108 ntBASIC5.77□□□□□ -1.49
ATF3P18847 Y_RNA.472-201ENST00000384322 102 ntBASIC5.77□□□□□ -1.49
ATF3P18847 SNORA68.2-201ENST00000391263 128 ntBASIC5.77□□□□□ -1.49
ATF3P18847 AL136310.1-201ENST00000404926 654 ntBASIC5.77□□□□□ -1.49
ATF3P18847 RNU6-272P-201ENST00000411028 104 ntBASIC5.77□□□□□ -1.49
ATF3P18847 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.77□□□□□ -1.49
ATF3P18847 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.77□□□□□ -1.49
ATF3P18847 HIGD1AP12-201ENST00000427832 281 ntBASIC5.77□□□□□ -1.49
ATF3P18847 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.77□□□□□ -1.49
ATF3P18847 PRDX3P3-201ENST00000447765 522 ntBASIC5.77□□□□□ -1.49
ATF3P18847 AL589880.1-201ENST00000448271 287 ntBASIC5.77□□□□□ -1.49
ATF3P18847 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.77□□□□□ -1.49
ATF3P18847 AC104164.2-201ENST00000496953 495 ntBASIC5.77□□□□□ -1.49
ATF3P18847 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ATF3P18847 TCP11X3P-202ENST00000514289 1254 ntBASIC5.77□□□□□ -1.49
ATF3P18847 RN7SKP265-201ENST00000516448 223 ntBASIC5.77□□□□□ -1.49
ATF3P18847 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.77□□□□□ -1.49
ATF3P18847 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.77□□□□□ -1.49
ATF3P18847 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF3P18847 AC037471.2-201ENST00000564941 598 ntBASIC5.77□□□□□ -1.49
ATF3P18847 AL158211.1-201ENST00000566763 763 ntBASIC5.77□□□□□ -1.49
ATF3P18847 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF3P18847 AL445435.1-201ENST00000604232 665 ntBASIC5.77□□□□□ -1.49
ATF3P18847 AC009318.3-201ENST00000616916 503 ntBASIC5.77□□□□□ -1.49
ATF3P18847 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.77□□□□□ -1.49
ATF3P18847 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATF3P18847 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ATF3P18847 ZNF663P-202ENST00000641770 1131 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms