Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
PDGFAP04085 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
PDGFAP04085 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
PDGFAP04085 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFAP04085 BIN2P1-201ENST00000504996 1530 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFAP04085 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFAP04085 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFAP04085 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFAP04085 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
PDGFAP04085 AC232271.1-201ENST00000602455 2715 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 GTF2IP4-201ENST00000453092 2054 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFAP04085 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFAP04085 RNA5SP110-201ENST00000362638 115 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 RNA5SP65-201ENST00000363166 119 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 RNU4-66P-201ENST00000365199 138 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 MIR19A-201ENST00000384878 82 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 MIR559-201ENST00000385188 96 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 Y_RNA.579-201ENST00000390939 94 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 AL031985.1-201ENST00000392713 418 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 AL161631.1-201ENST00000417933 486 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 BEND7P1-201ENST00000422058 457 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 CHEK2P5-201ENST00000423877 246 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.94□□□□□ -1.46
PDGFAP04085 LYPLA1P1-201ENST00000434514 622 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.94□□□□□ -1.46
PDGFAP04085 AL645936.1-201ENST00000441979 518 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 AL596266.1-201ENST00000448132 400 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.94□□□□□ -1.46
PDGFAP04085 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFAP04085 BTF3P13-201ENST00000513224 490 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 RFPL4AP5-201ENST00000514977 504 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 Y_RNA.665-201ENST00000516177 98 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 RN7SKP219-201ENST00000516825 296 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.94□□□□□ -1.46
PDGFAP04085 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.94□□□□□ -1.46
PDGFAP04085 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFAP04085 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFAP04085 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFAP04085 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFAP04085 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.94□□□□□ -1.46
PDGFAP04085 AC011445.2-201ENST00000599274 173 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFAP04085 AC004908.2-201ENST00000609090 574 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.94□□□□□ -1.46
PDGFAP04085 AC092266.1-201ENST00000610958 165 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 MIR6085-201ENST00000618314 110 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFAP04085 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFAP04085 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PDGFAP04085 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC5.94□□□□□ -1.46
PDGFAP04085 MTCO1P9-201ENST00000505577 1534 ntBASIC5.94□□□□□ -1.46
PDGFAP04085 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFAP04085 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PDGFAP04085 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PDGFAP04085 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFAP04085 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PDGFAP04085 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 AC140134.1-201ENST00000511830 3544 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PDGFAP04085 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFAP04085 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PDGFAP04085 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.93□□□□□ -1.46
PDGFAP04085 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PDGFAP04085 HSPE1P11-201ENST00000339579 310 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RNA5SP510-201ENST00000364697 99 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RN7SKP81-201ENST00000365603 331 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RNU6-43P-201ENST00000384302 107 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RNU6-1297P-201ENST00000384415 104 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RNU11-201ENST00000387069 134 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RNU6-278P-201ENST00000390945 109 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 SNORA75.4-201ENST00000391278 119 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AL606923.1-201ENST00000406616 190 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RN7SKP281-201ENST00000410472 352 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RN7SKP271-201ENST00000410528 320 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RN7SKP247-201ENST00000411094 308 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 HMGN1P24-201ENST00000412282 298 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 ARL5AP1-201ENST00000418991 388 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.93□□□□□ -1.46
PDGFAP04085 RPS7P3-201ENST00000443360 580 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RAC1P7-201ENST00000445367 377 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.93□□□□□ -1.46
PDGFAP04085 AC097463.1-201ENST00000447288 481 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFAP04085 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.93□□□□□ -1.46
PDGFAP04085 RPS4XP10-201ENST00000465034 731 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RPL23AP11-201ENST00000475260 469 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 RN7SL174P-201ENST00000475578 289 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AC126389.1-201ENST00000477436 290 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AL139099.1-201ENST00000497398 403 ntBASIC5.93□□□□□ -1.46
PDGFAP04085 AC025458.1-201ENST00000506046 166 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms