Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MT-ND1P03886 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
MT-ND1P03886 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MT-ND1P03886 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
MT-ND1P03886 AL356489.2-201ENST00000566968 3528 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MT-ND1P03886 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC053481.2-202ENST00000582394 1500 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.82□□□□□ -1.8
MT-ND1P03886 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MT-ND1P03886 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MT-ND1P03886 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MT-ND1P03886 XIAPP3-201ENST00000312918 795 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 RNU1-14P-201ENST00000362759 152 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 RNA5SP505-201ENST00000364748 108 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.82□□□□□ -1.8
MT-ND1P03886 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
MT-ND1P03886 P2RY10P2-201ENST00000416730 913 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.82□□□□□ -1.8
MT-ND1P03886 RPL7P4-203ENST00000430239 730 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.82□□□□□ -1.8
MT-ND1P03886 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC009963.2-201ENST00000453431 138 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC146507.1-201ENST00000468335 354 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AC073522.1-201ENST00000483312 377 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.82□□□□□ -1.8
MT-ND1P03886 HPRT1P1-201ENST00000509498 657 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AC104108.1-201ENST00000509930 412 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC026726.1-201ENST00000512859 601 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AC110760.3-202ENST00000515177 371 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 Vault.1-201ENST00000516474 102 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 NARSP2-201ENST00000518524 679 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC118942.1-201ENST00000529674 1035 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.82□□□□□ -1.8
MT-ND1P03886 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.82□□□□□ -1.8
MT-ND1P03886 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC022655.2-201ENST00000577280 318 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 MIR4789-201ENST00000577469 82 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.82□□□□□ -1.8
MT-ND1P03886 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MT-ND1P03886 AL606834.3-201ENST00000602615 496 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AC018754.1-201ENST00000607486 925 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AC090912.3-201ENST00000609775 533 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.82□□□□□ -1.8
MT-ND1P03886 FAM27D1-201ENST00000612308 341 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AL050303.3-201ENST00000613704 284 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AC073569.3-201ENST00000619055 682 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.82□□□□□ -1.8
MT-ND1P03886 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.82□□□□□ -1.8
MT-ND1P03886 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MT-ND1P03886 MFSD8-216ENST00000641147 4009 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
MT-ND1P03886 AC011978.2-201ENST00000569835 2054 ntBASIC3.82□□□□□ -1.8
MT-ND1P03886 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MT-ND1P03886 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MT-ND1P03886 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
MT-ND1P03886 AL158163.1-201ENST00000603915 1649 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.81□□□□□ -1.8
MT-ND1P03886 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MT-ND1P03886 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
MT-ND1P03886 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.81□□□□□ -1.8
MT-ND1P03886 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MT-ND1P03886 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MT-ND1P03886 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.81□□□□□ -1.8
MT-ND1P03886 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.81□□□□□ -1.8
MT-ND1P03886 RNU6-1339P-201ENST00000363574 91 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 SNORD35B-201ENST00000363660 87 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 RNU6-298P-201ENST00000390888 96 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
MT-ND1P03886 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MT-ND1P03886 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.81□□□□□ -1.8
MT-ND1P03886 UBE2V1P9-201ENST00000414760 368 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 AL732292.1-201ENST00000426692 226 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MT-ND1P03886 USP12PY-201ENST00000427677 1064 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 BRWD1P3-201ENST00000428816 390 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 AC004854.1-201ENST00000440356 349 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 AL138878.2-201ENST00000440581 1241 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.81□□□□□ -1.8
MT-ND1P03886 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.81□□□□□ -1.8
MT-ND1P03886 snoU13.7-201ENST00000459220 104 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.81□□□□□ -1.8
MT-ND1P03886 AC087385.1-201ENST00000475062 312 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 GTF2IP9-201ENST00000502460 301 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.81□□□□□ -1.8
MT-ND1P03886 SNX5P1-201ENST00000505757 1041 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 AC008885.2-201ENST00000509506 930 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 PTGES3P3-201ENST00000511479 482 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 SNORA19.3-201ENST00000516165 130 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 RNU7-143P-201ENST00000516781 65 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 RN7SKP277-201ENST00000516895 283 ntBASIC3.81□□□□□ -1.8
MT-ND1P03886 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms