Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA1P02708 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHRNA1P02708 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.2□□□□□ -1.74
CHRNA1P02708 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
CHRNA1P02708 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CHRNA1P02708 AL139811.1-201ENST00000424779 2299 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA1P02708 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA1P02708 AL589826.1-201ENST00000340697 249 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA1P02708 AL590290.1-201ENST00000405336 380 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 HMGB1P13-201ENST00000406019 642 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 FO393419.3-201ENST00000428741 282 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 HSPD1P21-201ENST00000436541 245 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA1P02708 AC018635.1-201ENST00000468292 1030 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA1P02708 AC017037.1-201ENST00000508460 471 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 HMGN1P11-201ENST00000508668 303 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA1P02708 HMGN1P15-201ENST00000513870 295 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 AC004923.2-201ENST00000529649 369 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.19□□□□□ -1.74
CHRNA1P02708 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CHRNA1P02708 CKS1BP1-201ENST00000555221 240 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 AC017100.2-201ENST00000584628 355 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.19□□□□□ -1.74
CHRNA1P02708 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA1P02708 AC123768.4-201ENST00000616244 701 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 AC025016.1-201ENST00000616746 682 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA1P02708 AC015967.1-201ENST00000619893 476 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.19□□□□□ -1.74
CHRNA1P02708 AL356490.1-201ENST00000623079 479 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA1P02708 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.19□□□□□ -1.74
CHRNA1P02708 ZNF90P1-201ENST00000480493 1951 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA1P02708 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA1P02708 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA1P02708 GTF2H2B-203ENST00000508065 1432 ntBASIC4.19□□□□□ -1.74
CHRNA1P02708 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.19□□□□□ -1.74
CHRNA1P02708 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA1P02708 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA1P02708 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA1P02708 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
CHRNA1P02708 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
CHRNA1P02708 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA1P02708 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA1P02708 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CHRNA1P02708 MIR183-201ENST00000384958 110 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 HMGB1P10-201ENST00000395823 563 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 SOD2P1-201ENST00000396543 562 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.18□□□□□ -1.74
CHRNA1P02708 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.18□□□□□ -1.74
CHRNA1P02708 RPS29P4-201ENST00000414733 161 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 MTND4P11-201ENST00000417020 1058 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.18□□□□□ -1.74
CHRNA1P02708 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.18□□□□□ -1.74
CHRNA1P02708 AL035458.1-201ENST00000433096 585 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.18□□□□□ -1.74
CHRNA1P02708 BTBD7P2-201ENST00000441962 620 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 AC007000.2-201ENST00000442564 487 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 RPS15AP29-201ENST00000445539 400 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 PRDX3P3-201ENST00000447765 522 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 RPL7P24-201ENST00000493052 752 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 AC139783.2-201ENST00000504847 1145 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.18□□□□□ -1.74
CHRNA1P02708 AC110768.1-201ENST00000509222 400 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 AC010285.3-201ENST00000511668 676 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.18□□□□□ -1.74
CHRNA1P02708 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.18□□□□□ -1.74
CHRNA1P02708 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CHRNA1P02708 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.18□□□□□ -1.74
CHRNA1P02708 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.18□□□□□ -1.74
CHRNA1P02708 ZNF92P3-201ENST00000596594 954 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.18□□□□□ -1.74
CHRNA1P02708 U6.105-201ENST00000637379 88 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.18□□□□□ -1.74
CHRNA1P02708 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA1P02708 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.18□□□□□ -1.74
CHRNA1P02708 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA1P02708 LINC00561-201ENST00000565815 2738 ntBASIC4.18□□□□□ -1.74
CHRNA1P02708 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA1P02708 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.17□□□□□ -1.74
CHRNA1P02708 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CHRNA1P02708 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHRNA1P02708 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CHRNA1P02708 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHRNA1P02708 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHRNA1P02708 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CHRNA1P02708 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.17□□□□□ -1.74
CHRNA1P02708 MIR142-201ENST00000384835 87 ntBASIC4.17□□□□□ -1.74
CHRNA1P02708 TAF9BP2-201ENST00000400856 499 ntBASIC4.17□□□□□ -1.74
CHRNA1P02708 AL356057.1-202ENST00000402263 756 ntBASIC4.17□□□□□ -1.74
CHRNA1P02708 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CHRNA1P02708 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.17□□□□□ -1.74
CHRNA1P02708 ELOCP18-201ENST00000434209 337 ntBASIC4.17□□□□□ -1.74
CHRNA1P02708 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.17□□□□□ -1.74
CHRNA1P02708 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms