Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.07□□□□□ -1.76
COL1A1P02452 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
COL1A1P02452 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.07□□□□□ -1.76
COL1A1P02452 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
COL1A1P02452 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.07□□□□□ -1.76
COL1A1P02452 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL1A1P02452 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
COL1A1P02452 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL1A1P02452 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
COL1A1P02452 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
COL1A1P02452 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
COL1A1P02452 RNU4-47P-201ENST00000410876 114 ntBASIC4.06□□□□□ -1.76
COL1A1P02452 AL024507.1-201ENST00000412741 274 ntBASIC4.06□□□□□ -1.76
COL1A1P02452 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.06□□□□□ -1.76
COL1A1P02452 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.06□□□□□ -1.76
COL1A1P02452 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.06□□□□□ -1.76
COL1A1P02452 SEPT7P3-201ENST00000455017 621 ntBASIC4.06□□□□□ -1.76
COL1A1P02452 S100A11P2-201ENST00000467589 312 ntBASIC4.06□□□□□ -1.76
COL1A1P02452 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.06□□□□□ -1.76
COL1A1P02452 RPL5P23-201ENST00000496040 868 ntBASIC4.06□□□□□ -1.76
COL1A1P02452 CYP2C60P-201ENST00000566088 139 ntBASIC4.06□□□□□ -1.76
COL1A1P02452 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.06□□□□□ -1.76
COL1A1P02452 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.06□□□□□ -1.76
COL1A1P02452 CEP170P1-201ENST00000502249 4587 ntBASIC4.06□□□□□ -1.76
COL1A1P02452 AC006504.1-201ENST00000562493 3666 ntBASIC4.06□□□□□ -1.76
COL1A1P02452 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL1A1P02452 TNPO1P3-201ENST00000436471 2662 ntBASIC4.06□□□□□ -1.76
COL1A1P02452 AL513302.2-201ENST00000562313 1842 ntBASIC4.06□□□□□ -1.76
COL1A1P02452 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.06□□□□□ -1.76
COL1A1P02452 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.06□□□□□ -1.76
COL1A1P02452 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
COL1A1P02452 RNU1-140P-201ENST00000365040 165 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 RN7SKP56-201ENST00000410513 331 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.05□□□□□ -1.76
COL1A1P02452 AC097262.1-201ENST00000452559 548 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 DNAJC19P1-201ENST00000455312 319 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 AL133477.1-201ENST00000457472 514 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 AC069306.1-201ENST00000507006 843 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 RNA5SP341-201ENST00000516261 117 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.05□□□□□ -1.76
COL1A1P02452 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.05□□□□□ -1.76
COL1A1P02452 AL121594.4-201ENST00000556211 1196 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.05□□□□□ -1.76
COL1A1P02452 AC006539.2-201ENST00000601729 572 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.05□□□□□ -1.76
COL1A1P02452 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.05□□□□□ -1.76
COL1A1P02452 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL1A1P02452 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
COL1A1P02452 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL1A1P02452 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.05□□□□□ -1.76
COL1A1P02452 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL1A1P02452 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
COL1A1P02452 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.05□□□□□ -1.76
COL1A1P02452 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
COL1A1P02452 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.05□□□□□ -1.76
COL1A1P02452 GCNT6-201ENST00000379591 934 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.05□□□□□ -1.76
COL1A1P02452 MTCO3P16-201ENST00000454456 754 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.05□□□□□ -1.76
COL1A1P02452 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
COL1A1P02452 AC010653.1-201ENST00000571108 881 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 AC141257.3-201ENST00000572906 215 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.05□□□□□ -1.76
COL1A1P02452 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.05□□□□□ -1.76
COL1A1P02452 AL162274.2-201ENST00000614406 332 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 AC105227.2-201ENST00000615075 605 ntBASIC4.05□□□□□ -1.76
COL1A1P02452 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.04□□□□□ -1.76
COL1A1P02452 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
COL1A1P02452 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL1A1P02452 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
COL1A1P02452 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
COL1A1P02452 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL1A1P02452 NACA3P-201ENST00000359690 648 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
COL1A1P02452 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 USP9YP36-201ENST00000424581 829 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.04□□□□□ -1.76
COL1A1P02452 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.04□□□□□ -1.76
COL1A1P02452 USP9YP31-201ENST00000431405 881 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 HMGB3P9-201ENST00000441799 583 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 TMED11P-201ENST00000479478 690 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 AC011825.1-201ENST00000484967 388 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 RPS6P4-201ENST00000494693 758 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 PCBP2P3-201ENST00000509726 843 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.04□□□□□ -1.76
COL1A1P02452 HIGD1AP3-201ENST00000515857 278 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 LARP7P3-201ENST00000579888 337 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 AC006504.3-201ENST00000586818 523 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 AC084036.1-201ENST00000609190 508 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.04□□□□□ -1.76
COL1A1P02452 AC100793.4-201ENST00000613683 429 ntBASIC4.04□□□□□ -1.76
COL1A1P02452 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
COL1A1P02452 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
COL1A1P02452 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
COL1A1P02452 RPL12P46-201ENST00000436610 195 ntBASIC4.03□□□□□ -1.76
COL1A1P02452 APOOP4-201ENST00000513530 597 ntBASIC4.03□□□□□ -1.76
COL1A1P02452 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.03□□□□□ -1.76
COL1A1P02452 MTCO3P22-201ENST00000603219 784 ntBASIC4.03□□□□□ -1.76
COL1A1P02452 AC093732.2-201ENST00000607950 274 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms