Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC1.48□□□□□ -2.17
USH2AO75445 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 NMD3P1-201ENST00000439704 1488 ntBASIC1.48□□□□□ -2.17
USH2AO75445 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 AC068647.1-201ENST00000489539 2265 ntBASIC1.48□□□□□ -2.17
USH2AO75445 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
USH2AO75445 RPL35AP12-201ENST00000425362 338 ntBASIC1.48□□□□□ -2.17
USH2AO75445 GTF3AP5-201ENST00000442645 697 ntBASIC1.48□□□□□ -2.17
USH2AO75445 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 AC100770.1-201ENST00000532310 322 ntBASIC1.48□□□□□ -2.17
USH2AO75445 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC1.48□□□□□ -2.17
USH2AO75445 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
USH2AO75445 AC097634.1-201ENST00000604491 2467 ntBASIC1.48□□□□□ -2.17
USH2AO75445 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC1.48□□□□□ -2.17
USH2AO75445 ZNF72P-201ENST00000425869 1908 ntBASIC1.48□□□□□ -2.17
USH2AO75445 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 THAP12P8-201ENST00000447914 2115 ntBASIC1.48□□□□□ -2.17
USH2AO75445 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 OR4G2P-202ENST00000641004 1759 ntBASIC1.48□□□□□ -2.17
USH2AO75445 CR383658.2-201ENST00000547576 1525 ntBASIC1.48□□□□□ -2.17
USH2AO75445 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 AC000374.1-201ENST00000434698 1745 ntBASIC1.48□□□□□ -2.17
USH2AO75445 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 RPL7AP73-201ENST00000413490 353 ntBASIC1.48□□□□□ -2.17
USH2AO75445 AL356535.1-201ENST00000440335 398 ntBASIC1.48□□□□□ -2.17
USH2AO75445 RNA5SP230-201ENST00000517039 122 ntBASIC1.48□□□□□ -2.17
USH2AO75445 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC1.48□□□□□ -2.17
USH2AO75445 TRAV15-201ENST00000556680 249 ntBASIC1.48□□□□□ -2.17
USH2AO75445 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC1.48□□□□□ -2.17
USH2AO75445 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC1.48□□□□□ -2.17
USH2AO75445 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC1.48□□□□□ -2.17
USH2AO75445 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.48□□□□□ -2.17
USH2AO75445 RNU4-47P-201ENST00000410876 114 ntBASIC1.48□□□□□ -2.17
USH2AO75445 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC1.48□□□□□ -2.17
USH2AO75445 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.48□□□□□ -2.17
USH2AO75445 AL591623.2-201ENST00000449978 222 ntBASIC1.48□□□□□ -2.17
USH2AO75445 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 SETP12-201ENST00000514068 805 ntBASIC1.48□□□□□ -2.17
USH2AO75445 AC107016.2-201ENST00000547968 190 ntBASIC1.48□□□□□ -2.17
USH2AO75445 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 AC027216.1-201ENST00000577726 685 ntBASIC1.48□□□□□ -2.17
USH2AO75445 MIR2682-201ENST00000580305 110 ntBASIC1.48□□□□□ -2.17
USH2AO75445 AC009977.1-201ENST00000586015 570 ntBASIC1.48□□□□□ -2.17
USH2AO75445 AC008759.1-201ENST00000589783 983 ntBASIC1.48□□□□□ -2.17
USH2AO75445 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC1.48□□□□□ -2.17
USH2AO75445 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
USH2AO75445 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
USH2AO75445 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
USH2AO75445 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
USH2AO75445 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC1.47□□□□□ -2.17
USH2AO75445 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.47□□□□□ -2.17
USH2AO75445 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC1.47□□□□□ -2.17
USH2AO75445 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.47□□□□□ -2.17
USH2AO75445 FTH1P6-201ENST00000430768 320 ntBASIC1.47□□□□□ -2.17
USH2AO75445 AC069285.2-201ENST00000440210 275 ntBASIC1.47□□□□□ -2.17
USH2AO75445 NDUFB9P3-201ENST00000521269 501 ntBASIC1.47□□□□□ -2.17
USH2AO75445 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.47□□□□□ -2.17
USH2AO75445 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC1.47□□□□□ -2.17
USH2AO75445 SNORD53-201ENST00000579969 78 ntBASIC1.47□□□□□ -2.17
USH2AO75445 AC010680.4-201ENST00000605334 543 ntBASIC1.47□□□□□ -2.17
USH2AO75445 AC012603.1-201ENST00000606424 528 ntBASIC1.47□□□□□ -2.17
USH2AO75445 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
USH2AO75445 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC1.47□□□□□ -2.17
USH2AO75445 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
USH2AO75445 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC1.47□□□□□ -2.17
USH2AO75445 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 RPL23AP36-201ENST00000413895 458 ntBASIC1.47□□□□□ -2.17
USH2AO75445 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.47□□□□□ -2.17
USH2AO75445 SCARNA17.1-201ENST00000516211 143 ntBASIC1.47□□□□□ -2.17
USH2AO75445 SCARNA17.2-201ENST00000516334 143 ntBASIC1.47□□□□□ -2.17
USH2AO75445 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC1.47□□□□□ -2.17
USH2AO75445 SCARNA17.4-201ENST00000614296 143 ntBASIC1.47□□□□□ -2.17
USH2AO75445 AC234782.5-201ENST00000617723 324 ntBASIC1.47□□□□□ -2.17
USH2AO75445 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
USH2AO75445 AC080128.1-201ENST00000474389 1917 ntBASIC1.47□□□□□ -2.17
USH2AO75445 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms