Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL035696.2-201ENST00000407941 709 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 RNU4-25P-201ENST00000410569 230 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.69□□□□□ -1.82
SHOX2O60902 BOLA3P4-201ENST00000418151 400 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 TCEA1P2-201ENST00000420496 906 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 RPS27AP12-201ENST00000429552 465 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.69□□□□□ -1.82
SHOX2O60902 AP000926.1-201ENST00000479573 241 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.69□□□□□ -1.82
SHOX2O60902 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.69□□□□□ -1.82
SHOX2O60902 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.69□□□□□ -1.82
SHOX2O60902 RNA5SP179-201ENST00000517284 121 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.69□□□□□ -1.82
SHOX2O60902 TRAV37-201ENST00000553906 342 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.69□□□□□ -1.82
SHOX2O60902 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.69□□□□□ -1.82
SHOX2O60902 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.69□□□□□ -1.82
SHOX2O60902 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.69□□□□□ -1.82
SHOX2O60902 AL049844.2-201ENST00000604280 628 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 AC067959.1-201ENST00000604334 379 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 AC114781.5-201ENST00000615297 108 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 AL136964.1-201ENST00000622038 2990 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 AC110801.1-201ENST00000623590 212 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 AC119674.1-212ENST00000641155 993 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.69□□□□□ -1.82
SHOX2O60902 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SHOX2O60902 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SHOX2O60902 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.69□□□□□ -1.82
SHOX2O60902 AL139811.1-201ENST00000424779 2299 ntBASIC3.69□□□□□ -1.82
SHOX2O60902 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SHOX2O60902 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHOX2O60902 AC092326.2-201ENST00000624772 1561 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 LARP1BP1-201ENST00000506036 1359 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 AC096656.1-201ENST00000623826 1364 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SHOX2O60902 MIR383-201ENST00000362257 73 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 RNA5SP383-201ENST00000362934 120 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 SNORD56.3-201ENST00000363507 71 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.68□□□□□ -1.82
SHOX2O60902 RNA5SP424-201ENST00000390988 115 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 RPL31P52-201ENST00000407532 367 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 RANP4-201ENST00000413361 655 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.68□□□□□ -1.82
SHOX2O60902 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.68□□□□□ -1.82
SHOX2O60902 NPM1P24-201ENST00000428039 894 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.68□□□□□ -1.82
SHOX2O60902 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.68□□□□□ -1.82
SHOX2O60902 ACTR3P2-201ENST00000439585 1257 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.68□□□□□ -1.82
SHOX2O60902 C1DP3-201ENST00000455013 423 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 HMGN1P18-201ENST00000457642 277 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.68□□□□□ -1.82
SHOX2O60902 RPL21P11-201ENST00000461458 483 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.68□□□□□ -1.82
SHOX2O60902 SNORA64.4-201ENST00000516632 81 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.68□□□□□ -1.82
SHOX2O60902 NPM1P47-201ENST00000560843 856 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 MIR3158-1-201ENST00000583596 81 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 KC877982.1-201ENST00000602313 470 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 AC005191.1-201ENST00000603950 358 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 AL163642.2-201ENST00000604722 1019 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.68□□□□□ -1.82
SHOX2O60902 AL121890.3-201ENST00000618494 516 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.68□□□□□ -1.82
SHOX2O60902 USP8P1-201ENST00000494673 3183 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.68□□□□□ -1.82
SHOX2O60902 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHOX2O60902 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.68□□□□□ -1.82
SHOX2O60902 AC007823.1-201ENST00000569932 1566 ntBASIC3.68□□□□□ -1.82
SHOX2O60902 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHOX2O60902 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHOX2O60902 AC116096.1-201ENST00000566804 2314 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHOX2O60902 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHOX2O60902 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHOX2O60902 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHOX2O60902 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHOX2O60902 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.67□□□□□ -1.82
SHOX2O60902 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHOX2O60902 RNA5SP366-201ENST00000365454 123 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SHOX2O60902 PTMAP5-201ENST00000393073 333 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.67□□□□□ -1.82
SHOX2O60902 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.67□□□□□ -1.82
SHOX2O60902 AC068533.1-201ENST00000418542 415 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 BTF3P9-201ENST00000418784 283 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AC012498.1-201ENST00000424037 437 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 FAR1P1-201ENST00000427163 934 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 USP9YP31-201ENST00000431405 881 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.67□□□□□ -1.82
SHOX2O60902 VN1R48P-201ENST00000448149 1036 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.67□□□□□ -1.82
SHOX2O60902 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHOX2O60902 AC007967.1-201ENST00000455422 1159 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 RPL23AP62-201ENST00000463396 453 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 AC104629.2-201ENST00000468627 598 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 RN7SL303P-201ENST00000469773 251 ntBASIC3.67□□□□□ -1.82
SHOX2O60902 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SHOX2O60902 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.67□□□□□ -1.82
SHOX2O60902 FABP5P12-201ENST00000515543 389 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms