Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMAD6O43541 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.55□□□□□ -1.68
SMAD6O43541 ZNF849P-201ENST00000594711 1566 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMAD6O43541 AP000542.2-201ENST00000623199 6179 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.55□□□□□ -1.68
SMAD6O43541 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SMAD6O43541 AC022893.2-201ENST00000564832 3296 ntBASIC4.55□□□□□ -1.68
SMAD6O43541 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SMAD6O43541 CCT8P1-201ENST00000413611 1657 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 AC008033.1-201ENST00000216407 1162 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 SNORD116.1-201ENST00000365628 92 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 SNORD65-201ENST00000391079 73 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 RNU4-25P-201ENST00000410569 230 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.54□□□□□ -1.68
SMAD6O43541 RPL21P108-201ENST00000413857 481 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 BTF3P8-201ENST00000414577 526 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 RPS7P9-201ENST00000414704 586 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 MTCO3P41-201ENST00000414801 328 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.54□□□□□ -1.68
SMAD6O43541 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 GTF2IP2-201ENST00000424290 697 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 C1DP1-201ENST00000426049 402 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 AL593851.1-201ENST00000426171 157 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 RPS26P2-201ENST00000440331 348 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.54□□□□□ -1.68
SMAD6O43541 TAF9P1-201ENST00000445421 515 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 RPL12P26-201ENST00000452430 487 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.54□□□□□ -1.68
SMAD6O43541 TAF9P2-201ENST00000454958 515 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 RPS27AP17-201ENST00000463344 455 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 BZW1P2-201ENST00000473537 826 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 AC026979.1-201ENST00000492525 396 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.54□□□□□ -1.68
SMAD6O43541 ARL4AP1-201ENST00000503220 705 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 RNA5SP446-201ENST00000515955 82 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.54□□□□□ -1.68
SMAD6O43541 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.54□□□□□ -1.68
SMAD6O43541 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.54□□□□□ -1.68
SMAD6O43541 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.54□□□□□ -1.68
SMAD6O43541 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.54□□□□□ -1.68
SMAD6O43541 MTATP6P3-201ENST00000581686 676 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 MIR4801-201ENST00000582704 82 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.54□□□□□ -1.68
SMAD6O43541 AP001269.3-201ENST00000588718 329 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.54□□□□□ -1.68
SMAD6O43541 AL163642.2-201ENST00000604722 1019 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 AC092354.2-201ENST00000607786 514 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 OR6R2P-201ENST00000609216 300 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 AL355073.2-201ENST00000612106 557 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.54□□□□□ -1.68
SMAD6O43541 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.54□□□□□ -1.68
SMAD6O43541 AC083809.1-201ENST00000615051 472 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 AC011944.2-201ENST00000624440 683 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 AC139769.1-204ENST00000472297 1931 ntBASIC4.54□□□□□ -1.68
SMAD6O43541 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.54□□□□□ -1.68
SMAD6O43541 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SMAD6O43541 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SMAD6O43541 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMAD6O43541 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.53□□□□□ -1.68
SMAD6O43541 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMAD6O43541 AC126323.6-202ENST00000568092 3511 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMAD6O43541 Y_RNA.559-201ENST00000384686 107 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 RNU6-932P-201ENST00000391108 106 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 ATP5F1P3-201ENST00000397213 657 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 MTCO1P56-201ENST00000401674 224 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AC004022.2-201ENST00000413824 193 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AL590806.1-201ENST00000415818 853 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 RAD23BP2-201ENST00000416003 1207 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.53□□□□□ -1.68
SMAD6O43541 RPL7P53-201ENST00000421245 739 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.53□□□□□ -1.68
SMAD6O43541 DPY19L1P2-201ENST00000426647 915 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 RPL21P91-201ENST00000429231 479 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMAD6O43541 MOB1AP1-201ENST00000430903 535 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms