Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL391417.1-201ENST00000404100 426 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 HMGB3P18-201ENST00000406327 590 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.94□□□□□ -1.78
RIPK2O43353 TPT1P2-201ENST00000413105 503 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RIPK2O43353 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RIPK2O43353 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.94□□□□□ -1.78
RIPK2O43353 CBX1P1-201ENST00000440184 427 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 AC007000.2-201ENST00000442564 487 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.94□□□□□ -1.78
RIPK2O43353 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.94□□□□□ -1.78
RIPK2O43353 MTND3P4-201ENST00000453537 303 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 AC007688.1-201ENST00000475592 759 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 AC078785.3-201ENST00000476607 425 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.94□□□□□ -1.78
RIPK2O43353 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.94□□□□□ -1.78
RIPK2O43353 AC108475.1-201ENST00000507880 950 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.94□□□□□ -1.78
RIPK2O43353 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.94□□□□□ -1.78
RIPK2O43353 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.94□□□□□ -1.78
RIPK2O43353 AC091515.1-201ENST00000548110 679 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 AC091516.1-201ENST00000549191 703 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.94□□□□□ -1.78
RIPK2O43353 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.94□□□□□ -1.78
RIPK2O43353 PSMB7P1-201ENST00000556349 514 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.94□□□□□ -1.78
RIPK2O43353 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.94□□□□□ -1.78
RIPK2O43353 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.94□□□□□ -1.78
RIPK2O43353 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.94□□□□□ -1.78
RIPK2O43353 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RIPK2O43353 AC009101.1-201ENST00000568135 242 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.94□□□□□ -1.78
RIPK2O43353 SNRPGP15-201ENST00000600149 222 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 Z82195.1-201ENST00000604558 398 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 HMGN2P28-201ENST00000606102 262 ntBASIC3.94□□□□□ -1.78
RIPK2O43353 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
RIPK2O43353 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RIPK2O43353 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RIPK2O43353 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.94□□□□□ -1.78
RIPK2O43353 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RIPK2O43353 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RIPK2O43353 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RIPK2O43353 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.93□□□□□ -1.78
RIPK2O43353 RNA5SP366-201ENST00000365454 123 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.93□□□□□ -1.78
RIPK2O43353 ELOCP19-201ENST00000411919 318 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 HMGB3P31-201ENST00000413333 595 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.93□□□□□ -1.78
RIPK2O43353 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RIPK2O43353 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.93□□□□□ -1.78
RIPK2O43353 HMGB3P5-201ENST00000428894 612 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 RPS27AP12-201ENST00000429552 465 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 MOB1AP1-201ENST00000430903 535 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.93□□□□□ -1.78
RIPK2O43353 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.93□□□□□ -1.78
RIPK2O43353 RPS26P56-201ENST00000444468 240 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.93□□□□□ -1.78
RIPK2O43353 RPL23AP15-201ENST00000450202 459 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 AC233982.1-201ENST00000451247 436 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.93□□□□□ -1.78
RIPK2O43353 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.93□□□□□ -1.78
RIPK2O43353 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.93□□□□□ -1.78
RIPK2O43353 AL132838.2-201ENST00000492041 314 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.93□□□□□ -1.78
RIPK2O43353 UBE2CP3-201ENST00000502715 450 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.93□□□□□ -1.78
RIPK2O43353 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.93□□□□□ -1.78
RIPK2O43353 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.93□□□□□ -1.78
RIPK2O43353 AC103833.1-201ENST00000517442 172 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.93□□□□□ -1.78
RIPK2O43353 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.93□□□□□ -1.78
RIPK2O43353 YPEL5P3-201ENST00000547227 352 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RIPK2O43353 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.93□□□□□ -1.78
RIPK2O43353 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.93□□□□□ -1.78
RIPK2O43353 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.93□□□□□ -1.78
RIPK2O43353 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.93□□□□□ -1.78
RIPK2O43353 AC006116.5-201ENST00000591936 559 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 AC091488.1-201ENST00000604239 660 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 AL137849.1-201ENST00000604767 169 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 KATNBL1P1-201ENST00000605192 748 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 AC135178.6-201ENST00000605314 398 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 AP001033.2-201ENST00000609701 1003 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 U7.8-201ENST00000619968 63 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 MTCO1P18-201ENST00000455518 1419 ntBASIC3.93□□□□□ -1.78
RIPK2O43353 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RIPK2O43353 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RIPK2O43353 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RIPK2O43353 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.93□□□□□ -1.78
RIPK2O43353 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RIPK2O43353 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RIPK2O43353 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RIPK2O43353 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.92□□□□□ -1.78
RIPK2O43353 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RIPK2O43353 ELL2P4-201ENST00000446870 1376 ntBASIC3.92□□□□□ -1.78
RIPK2O43353 LARP1BP1-201ENST00000506036 1359 ntBASIC3.92□□□□□ -1.78
RIPK2O43353 MTND4P8-201ENST00000514997 1362 ntBASIC3.92□□□□□ -1.78
RIPK2O43353 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RIPK2O43353 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms