Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
TRIM38O00635 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 AL078604.1-201ENST00000404609 466 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM38O00635 FCF1P2-201ENST00000415284 583 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 TMBIM7P-201ENST00000418074 855 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 BOLA3P4-201ENST00000418151 400 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 MFSD13B-201ENST00000420133 1290 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM38O00635 COX6CP13-201ENST00000428703 226 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AL365396.1-201ENST00000430854 671 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AC005345.1-201ENST00000431868 217 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AC091390.1-201ENST00000433904 331 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM38O00635 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM38O00635 ARL4AP3-201ENST00000441452 574 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM38O00635 AL354714.3-201ENST00000447284 493 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 RPL7L1P1-201ENST00000448259 785 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 RPL21P134-201ENST00000453468 483 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 AC091180.1-201ENST00000462104 372 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 FTH1P2-201ENST00000466086 412 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 RN7SL354P-201ENST00000469282 294 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AC090686.1-201ENST00000481577 749 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM38O00635 AC091951.3-201ENST00000504093 246 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AC008549.1-201ENST00000512900 643 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 ENPP7P9-201ENST00000514456 627 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 FABP5P12-201ENST00000515543 389 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 C1GALT1P3-201ENST00000522049 819 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM38O00635 AC084824.1-201ENST00000550917 1005 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM38O00635 AC068446.3-201ENST00000555285 382 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM38O00635 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM38O00635 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM38O00635 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 AC009220.3-201ENST00000604318 586 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 RBM11P1-201ENST00000604951 799 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM38O00635 AL357078.3-201ENST00000607528 618 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AL451074.6-201ENST00000608512 729 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AP001521.2-201ENST00000608772 546 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM38O00635 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
TRIM38O00635 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 AC109315.1-201ENST00000584143 1347 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 ERCC6-202ENST00000374127 1782 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 SAMMSON-226ENST00000642089 1582 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM38O00635 AL592437.2-201ENST00000421655 2434 ntBASIC4.91□□□□□ -1.62
TRIM38O00635 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.9□□□□□ -1.62
TRIM38O00635 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.9□□□□□ -1.62
TRIM38O00635 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.9□□□□□ -1.62
TRIM38O00635 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM38O00635 ELL2P3-201ENST00000457883 1602 ntBASIC4.9□□□□□ -1.62
TRIM38O00635 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.9□□□□□ -1.62
TRIM38O00635 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.9□□□□□ -1.62
TRIM38O00635 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM38O00635 AC126755.2-208ENST00000327792 462 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AC138969.1-213ENST00000331436 462 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 RNU6-492P-201ENST00000363035 104 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 RNU6-251P-201ENST00000363235 104 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 RNU4-75P-201ENST00000364621 146 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.9□□□□□ -1.63
TRIM38O00635 RNA5SP80-201ENST00000410475 111 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 RN7SKP247-201ENST00000411094 308 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AL008987.1-201ENST00000415528 237 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM38O00635 AC119751.6-201ENST00000416712 186 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM38O00635 DPPA2P1-201ENST00000428060 556 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 NEK4P1-201ENST00000433383 879 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM38O00635 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM38O00635 YWHAZP8-201ENST00000436935 731 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM38O00635 EXTL2P1-201ENST00000446218 416 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.9□□□□□ -1.63
TRIM38O00635 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM38O00635 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM38O00635 AL133217.1-201ENST00000450980 425 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AC234781.3-201ENST00000452540 973 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM38O00635 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.9□□□□□ -1.63
TRIM38O00635 AL445433.1-201ENST00000457507 257 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms