Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 UBBP1-201ENST00000392399 473 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 MIR548I3-201ENST00000408378 149 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 MIR548I1-201ENST00000408810 149 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 RPL18AP14-201ENST00000417685 526 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 AP000936.3-201ENST00000438127 255 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 GAPDHP20-201ENST00000444107 1007 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 RPL23AP28-201ENST00000448062 470 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 GSTA11P-201ENST00000452866 669 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 SNORD121B-201ENST00000458838 81 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 RPL7AP23-201ENST00000482625 776 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CFAP99D6REC4 RN7SL143P-201ENST00000496780 297 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 AC093878.1-201ENST00000515630 432 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 AC140063.1-201ENST00000541343 259 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CFAP99D6REC4 MIR5010-201ENST00000582846 120 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 AL354984.3-201ENST00000604803 325 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 SNORA16A-202ENST00000628458 135 ntBASIC6.69□□□□□ -1.34
CFAP99D6REC4 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CFAP99D6REC4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CFAP99D6REC4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.69□□□□□ -1.34
CFAP99D6REC4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 RNA5SP382-201ENST00000363355 112 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 SNORA70.3-201ENST00000365075 132 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 Y_RNA.552-201ENST00000384665 112 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 MIR450B-201ENST00000401182 78 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 AL358176.3-201ENST00000420757 454 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 AC008267.5-201ENST00000424928 265 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 RSL24D1P6-201ENST00000426934 401 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 AL031681.1-201ENST00000443304 400 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 PFN1P11-201ENST00000445829 389 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 AL136126.1-201ENST00000473603 402 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 RN7SL267P-201ENST00000485107 261 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 AC104806.1-201ENST00000508720 308 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 AC004232.1-201ENST00000571388 208 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 MIR5095-201ENST00000578844 88 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 MIR3159-201ENST00000584572 74 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 AC020634.1-201ENST00000608701 549 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 MIR6070-201ENST00000613967 103 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 U2.1-201ENST00000618978 145 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 AC109780.1-201ENST00000451768 1344 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CFAP99D6REC4 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CFAP99D6REC4 AC073365.1-203ENST00000641055 1992 ntBASIC6.68□□□□□ -1.34
CFAP99D6REC4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CFAP99D6REC4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
CFAP99D6REC4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.67□□□□□ -1.34
CFAP99D6REC4 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.67□□□□□ -1.34
CFAP99D6REC4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.67□□□□□ -1.34
CFAP99D6REC4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CFAP99D6REC4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CFAP99D6REC4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CFAP99D6REC4 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.67□□□□□ -1.34
CFAP99D6REC4 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.67□□□□□ -1.34
CFAP99D6REC4 RNU6-61P-201ENST00000365528 109 ntBASIC6.67□□□□□ -1.34
CFAP99D6REC4 Y_RNA.389-201ENST00000383924 113 ntBASIC6.67□□□□□ -1.34
CFAP99D6REC4 Y_RNA.576-201ENST00000384781 102 ntBASIC6.67□□□□□ -1.34
CFAP99D6REC4 NDUFS5P1-201ENST00000405668 289 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms