Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AL592156.1-201ENST00000508758 304 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 KCTD9P2-201ENST00000512203 1013 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC119751.1-201ENST00000513357 765 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 RNA5SP73-201ENST00000516744 108 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AP003730.1-201ENST00000524605 285 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 UBTFL10-201ENST00000528532 562 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AL109766.1-201ENST00000555080 552 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC008759.1-201ENST00000589783 983 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 SLC25A36P1-201ENST00000590111 465 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC008751.2-201ENST00000597885 980 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 FAM27D1-201ENST00000612308 341 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC243654.2-201ENST00000612843 443 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AP006248.2-201ENST00000623309 592 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AL356121.2-201ENST00000624715 780 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 AC008013.2-202ENST00000637965 364 ntBASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SNX9Q9Y5X1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 ANKRD36P1-201ENST00000344424 659 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 RNU1-108P-201ENST00000362556 161 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 RNU6-353P-201ENST00000364266 108 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 RNU4-68P-201ENST00000364314 141 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AL136310.1-201ENST00000404926 654 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 UBTFL3-201ENST00000418934 1024 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 RPS3AP37-201ENST00000419176 745 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 C1DP1-201ENST00000426049 402 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AL353093.1-201ENST00000441292 436 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 ARL5AP2-201ENST00000444698 533 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC096992.1-201ENST00000459808 709 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 RN7SL41P-201ENST00000476144 297 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 UBTFL6-201ENST00000477929 1024 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 RPS6P4-201ENST00000494693 758 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 NDUFB4P12-201ENST00000513465 390 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 MRPL49P2-201ENST00000521066 465 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC006064.5-201ENST00000541782 248 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC027104.1-201ENST00000563702 681 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 NIFKP6-201ENST00000598115 845 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AL161729.3-201ENST00000603533 673 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC025588.2-201ENST00000604851 466 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC097478.2-201ENST00000610572 514 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC092106.3-201ENST00000611308 722 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC019278.1-201ENST00000623516 479 ntBASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX9Q9Y5X1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 LARP1BP1-201ENST00000506036 1359 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 ENSAP3-201ENST00000312710 333 ntBASIC4.56□□□□□ -1.68
SNX9Q9Y5X1 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms