Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL360081.1-201ENST00000428299 555 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 HIGD1AP11-201ENST00000438361 280 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 FABP5P2-201ENST00000439042 408 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC073909.1-201ENST00000447112 999 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 LINC01399-202ENST00000458450 244 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC087879.1-201ENST00000474343 374 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC068522.1-201ENST00000482895 345 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC116562.3-201ENST00000506136 177 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 RNA5SP206-201ENST00000516703 121 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 RNU6-897P-201ENST00000517135 105 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC068587.5-201ENST00000528506 175 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AP000907.2-201ENST00000530827 353 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 HSPE1P3-201ENST00000559254 309 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC097467.4-201ENST00000605504 141 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC103705.1-201ENST00000619013 241 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 AC123769.2-201ENST00000624332 5984 ntBASIC8.41□□□□□ -1.06
TRIM35Q9UPQ4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 EEF1A1P24-201ENST00000451469 1378 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 Y_RNA.2-201ENST00000362330 96 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 DHFRP6-201ENST00000401776 268 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 RNU2-25P-201ENST00000411041 191 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 Z99755.1-201ENST00000414048 380 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 CR769767.1-201ENST00000436337 346 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 RPL29P29-201ENST00000448725 423 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 CHEK2P4-201ENST00000450340 246 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 RPL9P32-201ENST00000464118 620 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 SIAH1P1-201ENST00000479411 923 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 RNU6-189P-201ENST00000516120 101 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 RNU6-397P-201ENST00000516226 104 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 SNORA31.6-201ENST00000516241 130 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 AC011494.1-201ENST00000596454 237 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 AC003973.3-201ENST00000624863 2822 ntBASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
TRIM35Q9UPQ4 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
TRIM35Q9UPQ4 OR5M2P-202ENST00000641241 4242 ntBASIC8.4□□□□□ -1.07
TRIM35Q9UPQ4 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
TRIM35Q9UPQ4 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC244517.1-201ENST00000606030 2086 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC005618.1-201ENST00000606901 3148 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC005183.1-201ENST00000603687 1979 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 Y_RNA.54-201ENST00000362766 105 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 Y_RNA.304-201ENST00000365011 112 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 SNORD20-201ENST00000384550 80 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 Y_RNA.526-201ENST00000384572 110 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 PRELID1P1-201ENST00000403549 660 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 U3.43-201ENST00000410734 213 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 RPS15AP30-201ENST00000420976 390 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 MED13P1-201ENST00000428342 171 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 TUBB4BP6-201ENST00000437576 479 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms