Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC008280.1-201ENST00000418851 412 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 MTCO2P5-201ENST00000422621 426 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 MTCO3P46-201ENST00000425787 232 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 HMGB3P24-201ENST00000433260 622 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 GAPDHP48-201ENST00000436626 961 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 AL121877.1-201ENST00000453704 622 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 FRG2FP-204ENST00000453982 852 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 snoU13.29-201ENST00000459370 104 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 TRBV5-2-201ENST00000489095 273 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 TOMM22P4-201ENST00000511318 336 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 EIF3KP3-201ENST00000514461 639 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC139365.2-201ENST00000517972 253 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC112191.2-201ENST00000522428 333 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC018552.1-201ENST00000562099 811 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC009117.1-201ENST00000563948 554 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 AL355375.2-201ENST00000574825 175 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 AC008687.2-201ENST00000597865 520 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 KC877982.1-201ENST00000602313 470 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 uc_338.5-201ENST00000611839 155 ntBASIC6.26□□□□□ -1.41
CNTN3Q9P232 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CNTN3Q9P232 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.26□□□□□ -1.41
CNTN3Q9P232 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CNTN3Q9P232 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CNTN3Q9P232 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CNTN3Q9P232 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 AL159987.1-201ENST00000347911 293 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 RNA5SP514-201ENST00000363717 111 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 Y_RNA.419-201ENST00000384041 102 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CNTN3Q9P232 RN7SKP140-201ENST00000411196 284 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 RN7SKP293-201ENST00000411389 296 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 NPM1P40-201ENST00000412758 733 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 MTCO3P12-201ENST00000416718 547 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 BMS1P17-202ENST00000416720 316 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 SLC35E1P1-201ENST00000419313 864 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 AL606489.2-201ENST00000433886 234 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 MTND6P18-201ENST00000439477 513 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 RPL23AP15-201ENST00000450202 459 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC233279.1-201ENST00000455300 423 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC023141.9-201ENST00000458734 412 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 RNU6-1218P-201ENST00000458990 108 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 RN7SL717P-201ENST00000478343 297 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC034222.1-201ENST00000494052 532 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CNTN3Q9P232 RNU6-714P-201ENST00000516963 103 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 RN7SL753P-201ENST00000581238 290 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 SNORD39.3-201ENST00000584451 71 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC006115.2-201ENST00000596823 202 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 AL360085.1-201ENST00000604713 532 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC093388.1-201ENST00000609166 430 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 MIR6729-201ENST00000618194 65 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.25□□□□□ -1.41
CNTN3Q9P232 AC069234.4-201ENST00000621276 412 ntBASIC6.25□□□□□ -1.41
CNTN3Q9P232 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms