Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCNB1IP1Q9NPC3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 RPL32P3-201ENST00000359025 275 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 RNU6-1293P-201ENST00000384077 107 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 RNU6-356P-201ENST00000384140 107 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 RN7SKP285-201ENST00000410137 318 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 RNU2-37P-201ENST00000410695 177 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 OR5BE1P-201ENST00000425977 939 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 C4BPAP2-201ENST00000428434 478 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 XKRY2-201ENST00000442362 1093 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 RPS4XP4-201ENST00000443195 763 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 RPS20P32-201ENST00000456044 356 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AC004801.2-202ENST00000463559 283 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 PTGES3P3-201ENST00000511479 482 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 SUMO2P20-201ENST00000520803 283 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AC090877.1-201ENST00000561418 344 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 CYP2C60P-201ENST00000566088 139 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AL445567.2-201ENST00000618935 498 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 RNU6-156P-201ENST00000621869 107 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 AC010608.2-201ENST00000624830 470 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 OR5BE1P-202ENST00000641168 1176 ntBASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.59□□□□□ -1.83
CCNB1IP1Q9NPC3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CCNB1IP1Q9NPC3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CCNB1IP1Q9NPC3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CCNB1IP1Q9NPC3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CCNB1IP1Q9NPC3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR141-201ENST00000384975 95 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 RNU11-4P-201ENST00000391149 133 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 RPS26P8-201ENST00000393490 348 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 DNAJC19P6-201ENST00000401853 280 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 HMGB3P19-201ENST00000403971 560 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 HMGB1P13-201ENST00000406019 642 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AL691447.1-201ENST00000419456 387 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 COX6CP15-201ENST00000426313 211 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 HIGD1AP4-201ENST00000430194 280 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC083863.1-201ENST00000438811 231 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 RPS7P5-201ENST00000441482 581 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC097499.1-201ENST00000444277 208 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 RPS29P31-201ENST00000446147 164 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 RPL29P29-201ENST00000448725 423 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 RPS17P13-201ENST00000448974 407 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC009220.1-201ENST00000451614 275 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 RPL23AP62-201ENST00000463396 453 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC010618.1-201ENST00000469924 477 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AL035404.1-201ENST00000497982 568 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 TMEM248P1-201ENST00000510579 951 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 RN7SKP141-201ENST00000516167 338 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 RN7SKP60-201ENST00000516985 239 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 MTND2P26-201ENST00000528255 1029 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AL139174.1-201ENST00000531489 886 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC074029.1-201ENST00000552531 1044 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 CENPUP2-201ENST00000555897 1186 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC006116.5-201ENST00000591936 559 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 NTAN1P1-201ENST00000603150 646 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC112503.1-201ENST00000608436 391 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR6716-201ENST00000613413 80 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC022079.2-201ENST00000619739 566 ntBASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.58□□□□□ -1.84
CCNB1IP1Q9NPC3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms