Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC107982.1-201ENST00000507171 1300 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 AC109315.1-201ENST00000584143 1347 ntBASIC4.42□□□□□ -1.7
BRF2Q9HAW0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.42□□□□□ -1.7
BRF2Q9HAW0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 PABPC1P7-201ENST00000413177 1513 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 KARSP3-201ENST00000571212 1504 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 LINC01355-201ENST00000566551 5444 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 RNU6-1279P-201ENST00000383917 103 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 MTND4P22-201ENST00000413116 1169 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AL008987.1-201ENST00000415528 237 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 CYCSP10-201ENST00000417973 294 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 RPL7P44-201ENST00000424827 742 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 VDAC1P6-201ENST00000430062 855 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 MTATP6P17-201ENST00000431030 672 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 COX7BP2-201ENST00000437976 242 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 FGF7P5-201ENST00000441829 291 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC009963.2-201ENST00000453431 138 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC091685.2-201ENST00000454924 864 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 RN7SL817P-201ENST00000480777 288 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC013828.1-201ENST00000481845 158 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 DEFB109F-201ENST00000491870 277 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 NDUFB5P1-201ENST00000508134 564 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 SNORA3.4-201ENST00000515969 96 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 RNA5SP464-201ENST00000516251 108 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 RNU6-1261P-201ENST00000517194 104 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AP001922.4-201ENST00000526967 290 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 GSTP1P1-201ENST00000548078 319 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC091042.1-201ENST00000579213 173 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 VN1R78P-201ENST00000597393 564 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC010680.3-201ENST00000604215 520 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AL009028.1-201ENST00000604895 802 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC091946.2-201ENST00000606105 291 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AL451074.6-201ENST00000608512 729 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AL355493.4-201ENST00000618530 292 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 MIR6853-201ENST00000619642 74 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 AC131971.1-201ENST00000332881 1482 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 CDR1-202ENST00000625883 1485 ntBASIC4.41□□□□□ -1.7
BRF2Q9HAW0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.41□□□□□ -1.7
BRF2Q9HAW0 MTCO1P24-201ENST00000515438 1558 ntBASIC4.4□□□□□ -1.7
BRF2Q9HAW0 AC092435.4-201ENST00000623012 4159 ntBASIC4.4□□□□□ -1.7
BRF2Q9HAW0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
BRF2Q9HAW0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
BRF2Q9HAW0 FAM133CP-201ENST00000332869 704 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 RNU1-20P-201ENST00000363314 162 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 RNU1-130P-201ENST00000363930 160 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 Y_RNA.192-201ENST00000363977 102 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 SNORA71.2-201ENST00000364941 134 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 RPS24P12-201ENST00000402084 394 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 RN7SKP199-201ENST00000410325 305 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 RNU2-28P-201ENST00000410457 189 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC009237.10-201ENST00000414112 510 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 LUZP4P1-201ENST00000415420 344 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 ATG4AP1-201ENST00000416893 538 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 RWDD4P2-201ENST00000426392 563 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 ATP5F1P1-201ENST00000433775 569 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 PTMAP6-201ENST00000439110 327 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 CEACAMP6-201ENST00000452007 574 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.4□□□□□ -1.71
BRF2Q9HAW0 AC022795.1-201ENST00000473808 480 ntBASIC4.4□□□□□ -1.71
BRF2Q9HAW0 RN7SL41P-201ENST00000476144 297 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms