Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 CABYRP1-201ENST00000465493 1045 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 BTF3L4P4-201ENST00000506381 449 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 AC005798.1-201ENST00000513715 387 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 TOMM20P2-201ENST00000540082 421 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 MTND5P3-201ENST00000438536 1800 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 NCAPGP1-201ENST00000505112 1814 ntBASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRRC40Q9H9A6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 RPL32P3-201ENST00000359025 275 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 MIR199A2-201ENST00000385289 110 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AL353692.2-201ENST00000407054 335 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AMD1P2-201ENST00000412936 992 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 Z97055.1-201ENST00000419730 712 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AC241520.1-201ENST00000422654 1099 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 CR848007.2-201ENST00000424918 787 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 OR51AB1P-201ENST00000429046 620 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 CKS1BP5-201ENST00000434172 273 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AL138799.3-201ENST00000438968 350 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 RPL23AP33-201ENST00000442301 452 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 MTND5P8-201ENST00000449817 1083 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 RPL9P32-201ENST00000464118 620 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 PPIAP15-201ENST00000479662 484 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AC126121.1-201ENST00000482313 553 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 RPS3AP6-201ENST00000484430 795 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AC004069.2-201ENST00000505438 1114 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 RNA5SP143-201ENST00000516936 115 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 RN7SKP96-201ENST00000516948 297 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AC008802.1-201ENST00000519121 791 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 NDUFA5P2-201ENST00000519723 344 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 OR6C73P-201ENST00000546432 358 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 CKS1BP1-201ENST00000555221 240 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AC090877.1-201ENST00000561418 344 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AC022079.2-201ENST00000619739 566 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 MIR6758-201ENST00000620653 63 ntBASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LRRC40Q9H9A6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 LINC00561-201ENST00000565815 2738 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 RNA5SP97-201ENST00000365006 84 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 RNU6-883P-201ENST00000384597 107 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 HMGN2P8-201ENST00000391458 268 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 PRRC2CP1-201ENST00000404428 159 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 BTBD10P2-201ENST00000404779 676 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 HMGB3P18-201ENST00000406327 590 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 RNA5SP317-201ENST00000410176 116 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 RNA5SP311-201ENST00000411290 116 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 OR5AW1P-201ENST00000426334 1006 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 IFNNP1-201ENST00000429219 553 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 AC098824.1-201ENST00000453565 980 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 DNAJC19P1-201ENST00000455312 319 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 MTCO1P30-201ENST00000515244 580 ntBASIC3.93□□□□□ -1.78
LRRC40Q9H9A6 RNA5SP315-201ENST00000516340 116 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms