Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC093536.2-201ENST00000565257 1406 ntBASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM55Q9BYV6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 RN7SKP226-201ENST00000364912 300 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 SNORD115.1-201ENST00000391109 76 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC005042.1-201ENST00000393397 800 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC004987.3-201ENST00000413879 771 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 RNF10P1-201ENST00000418589 369 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AL138785.1-201ENST00000425821 331 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 MTND6P13-201ENST00000443510 523 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 SBDSP1-204ENST00000453858 737 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 RN7SL269P-201ENST00000467795 305 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC034222.1-201ENST00000494052 532 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 TXNP6-201ENST00000510190 310 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC110775.1-201ENST00000513721 462 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 ATP5LP3-201ENST00000514223 304 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 PCNAP4-201ENST00000532690 730 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 EEF1B2P4-201ENST00000551398 348 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 RPL21P5-201ENST00000554662 472 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC007225.2-201ENST00000562529 256 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC103710.1-201ENST00000610003 901 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AL139099.4-201ENST00000614802 114 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AL122125.1-201ENST00000616999 600 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 AC012254.3-201ENST00000591183 2117 ntBASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
TRIM55Q9BYV6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 Z95327.2-201ENST00000414579 1873 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC027088.4-201ENST00000611559 1947 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 OR9K1P-202ENST00000641111 3217 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 OR9K1P-201ENST00000326513 941 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AL161781.1-201ENST00000354277 403 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 RNU6-730P-201ENST00000383954 104 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AL391361.1-201ENST00000405580 489 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 MIR1178-201ENST00000408396 91 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 RN7SKP293-201ENST00000411389 296 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 RPL35AP3-201ENST00000414680 288 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 PSMA6P3-201ENST00000428242 164 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC008065.1-201ENST00000428525 348 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC073614.1-201ENST00000438690 650 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 SDCBPP1-201ENST00000440192 890 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 FAM103A2P-201ENST00000444122 354 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 IGHV5-78-201ENST00000450948 295 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 GEMIN2P1-201ENST00000454246 752 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC022034.3-201ENST00000471393 478 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AL122020.1-201ENST00000472287 459 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC126182.1-201ENST00000478134 357 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC093267.1-201ENST00000489176 961 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC109927.2-201ENST00000506416 303 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AP003467.2-201ENST00000520175 319 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC024224.1-201ENST00000538284 609 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC122688.1-201ENST00000541494 223 ntBASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM55Q9BYV6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms