Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 RNA5SP183-201ENST00000362452 119 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 Y_RNA.270-201ENST00000364693 104 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 RNU1-115P-201ENST00000365329 160 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 RNU4-48P-201ENST00000365559 182 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 Y_RNA.380-201ENST00000365663 111 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AL034403.1-201ENST00000399414 885 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 RPS4XP9-201ENST00000405151 780 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 RNA5SP345-201ENST00000410646 108 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 PPIAP10-201ENST00000438675 458 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AC011753.3-201ENST00000443436 406 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 MTND1P17-201ENST00000448961 204 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 KPNA2P1-201ENST00000458289 1591 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 RN7SL269P-201ENST00000467795 305 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AC128716.1-201ENST00000475129 166 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 HSPD1P15-201ENST00000505573 1122 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AC131281.1-201ENST00000522984 164 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AC136624.4-201ENST00000573044 370 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 BNIP3P25-201ENST00000596023 559 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AC121334.2-201ENST00000605387 271 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 MIR92B-201ENST00000607575 96 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 EIF3FP1-201ENST00000613970 806 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AC009237.17-201ENST00000618111 748 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 XPOTP1-201ENST00000443317 2398 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 Y_RNA.212-201ENST00000364177 102 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC068538.1-201ENST00000376856 336 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 Y_RNA.464-201ENST00000384282 110 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 RNU6-125P-201ENST00000384505 107 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 RNU6-1081P-201ENST00000384537 107 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 RNU2-36P-201ENST00000410361 191 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC078974.1-201ENST00000411597 223 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AP000275.1-201ENST00000411943 390 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 ARL5AP1-201ENST00000418991 388 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 ATG3P1-201ENST00000419507 911 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 FTH1P10-202ENST00000430907 550 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC022034.3-201ENST00000471393 478 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 TRBV8-2-201ENST00000475637 270 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC022415.1-202ENST00000486612 523 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC011005.2-201ENST00000487324 359 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 AC008897.1-201ENST00000494006 347 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 RNU6-615P-201ENST00000516065 106 ntBASIC6.28□□□□□ -1.4
COL25A1Q9BXS0 Y_RNA.710-201ENST00000516975 110 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms