Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC108860.1-201ENST00000484521 383 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 RNA5SP206-201ENST00000516703 121 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LRCH3Q96II8 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 AL133399.1-201ENST00000527476 298 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LRCH3Q96II8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 AC011477.5-201ENST00000586571 259 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 AL031320.1-201ENST00000604177 357 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 SUMO2P15-201ENST00000604285 278 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 AC103710.2-201ENST00000609912 942 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 FAM27E2-201ENST00000619668 403 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LRCH3Q96II8 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
LRCH3Q96II8 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
LRCH3Q96II8 AC002525.1-201ENST00000624392 1622 ntBASIC7.15□□□□□ -1.27
LRCH3Q96II8 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
LRCH3Q96II8 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
LRCH3Q96II8 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
LRCH3Q96II8 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
LRCH3Q96II8 AL133243.4-201ENST00000623116 3109 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AL161781.1-201ENST00000354277 403 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 RNA5SP273-201ENST00000362484 113 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
LRCH3Q96II8 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LRCH3Q96II8 RNU6-48P-201ENST00000384161 107 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 SNORA70-201ENST00000384436 135 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 RPL24P7-201ENST00000399435 453 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 AC244452.1-201ENST00000413798 141 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AC064862.4-201ENST00000442180 334 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 NEFMP1-201ENST00000443423 1006 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 DEFA11P-201ENST00000446470 261 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 AL031584.1-201ENST00000447169 754 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 HMGB3P21-201ENST00000452483 547 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 AL138752.1-201ENST00000452964 351 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 AC083806.1-201ENST00000468934 316 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 SIAH1P1-201ENST00000479411 923 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 CR383656.1-201ENST00000484916 377 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 UBA52P3-201ENST00000491303 382 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AC087360.1-201ENST00000518788 616 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 TPRX1P1-201ENST00000557620 319 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AC010900.2-201ENST00000604508 210 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 AL355333.1-201ENST00000605632 279 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 AL159972.1-201ENST00000625150 448 ntBASIC7.14□□□□□ -1.27
LRCH3Q96II8 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
LRCH3Q96II8 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LRCH3Q96II8 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
LRCH3Q96II8 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.14□□□□□ -1.27
LRCH3Q96II8 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 Y_RNA.19-201ENST00000362462 99 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
LRCH3Q96II8 RNU6-1027P-201ENST00000383998 107 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 MIR143-201ENST00000385300 106 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 RNU6-55P-201ENST00000411092 107 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 RN7SKP293-201ENST00000411389 296 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 RNU2-6P-201ENST00000411404 190 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 AC011933.1-201ENST00000413334 321 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 AL133396.1-201ENST00000432048 687 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.13□□□□□ -1.27
LRCH3Q96II8 RPL23AP43-201ENST00000446445 471 ntBASIC7.13□□□□□ -1.27
LRCH3Q96II8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms