Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.35□□□□□ -1.39
HPS1Q92902 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS1Q92902 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
HPS1Q92902 CAP1P2-201ENST00000417455 1409 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS1Q92902 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
HPS1Q92902 AL137058.3-201ENST00000624531 3099 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS1Q92902 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.35□□□□□ -1.39
HPS1Q92902 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.35□□□□□ -1.39
HPS1Q92902 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HPS1Q92902 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS1Q92902 AC108751.5-201ENST00000492880 1336 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AL121886.1-201ENST00000358609 435 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 MIR335-201ENST00000362173 94 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 RNU6-179P-201ENST00000363350 107 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 RN7SKP174-201ENST00000363803 330 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.35□□□□□ -1.39
HPS1Q92902 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.35□□□□□ -1.39
HPS1Q92902 SNORA70.9-201ENST00000384370 135 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 MIR575-201ENST00000385013 94 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 MIR27A-201ENST00000385073 78 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 RN7SKP235-201ENST00000410662 305 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 RNU2-51P-201ENST00000410708 197 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 RNU2-6P-201ENST00000411404 190 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AC096664.2-201ENST00000411843 406 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.35□□□□□ -1.39
HPS1Q92902 NMD3P2-201ENST00000421815 761 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 EEF1GP7-201ENST00000422983 703 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AL590632.1-201ENST00000424289 371 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 SNX18P3-201ENST00000424993 835 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 RPSAP65-201ENST00000429660 595 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC6.35□□□□□ -1.39
HPS1Q92902 AC239800.1-201ENST00000442049 719 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC6.35□□□□□ -1.39
HPS1Q92902 CDC42P2-201ENST00000448566 569 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 CHEK2P4-201ENST00000450340 246 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AC005297.2-201ENST00000450430 606 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.35□□□□□ -1.39
HPS1Q92902 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HPS1Q92902 PPP1R11P1-201ENST00000486095 376 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.35□□□□□ -1.39
HPS1Q92902 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.35□□□□□ -1.39
HPS1Q92902 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.35□□□□□ -1.39
HPS1Q92902 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.35□□□□□ -1.39
HPS1Q92902 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.35□□□□□ -1.39
HPS1Q92902 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.35□□□□□ -1.39
HPS1Q92902 AC091516.1-201ENST00000549191 703 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AC138749.2-201ENST00000566048 167 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AC092718.4-201ENST00000566639 716 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.35□□□□□ -1.39
HPS1Q92902 AC011500.1-201ENST00000601963 469 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC6.35□□□□□ -1.39
HPS1Q92902 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.35□□□□□ -1.39
HPS1Q92902 AC006335.3-201ENST00000613408 292 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AC129908.1-201ENST00000624553 648 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AL159972.1-201ENST00000625150 448 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.35□□□□□ -1.39
HPS1Q92902 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HPS1Q92902 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS1Q92902 AC011504.1-201ENST00000623331 4103 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.35□□□□□ -1.39
HPS1Q92902 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.35□□□□□ -1.39
HPS1Q92902 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
HPS1Q92902 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS1Q92902 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS1Q92902 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS1Q92902 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.35□□□□□ -1.39
HPS1Q92902 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS1Q92902 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.35□□□□□ -1.39
HPS1Q92902 AP000432.2-201ENST00000624164 2048 ntBASIC6.35□□□□□ -1.39
HPS1Q92902 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HPS1Q92902 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HPS1Q92902 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.35□□□□□ -1.39
HPS1Q92902 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HPS1Q92902 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HPS1Q92902 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HPS1Q92902 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HPS1Q92902 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
HPS1Q92902 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HPS1Q92902 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HPS1Q92902 AC008669.1-201ENST00000565823 2178 ntBASIC6.34□□□□□ -1.39
HPS1Q92902 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
HPS1Q92902 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HPS1Q92902 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HPS1Q92902 AC011978.2-201ENST00000569835 2054 ntBASIC6.34□□□□□ -1.39
HPS1Q92902 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HPS1Q92902 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HPS1Q92902 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HPS1Q92902 SNORD115-7-201ENST00000365306 82 ntBASIC6.34□□□□□ -1.39
HPS1Q92902 RNU6-1117P-201ENST00000384525 104 ntBASIC6.34□□□□□ -1.39
HPS1Q92902 Y_RNA.526-201ENST00000384572 110 ntBASIC6.34□□□□□ -1.39
HPS1Q92902 MIR498-201ENST00000385134 124 ntBASIC6.34□□□□□ -1.39
HPS1Q92902 RNA5SP219-201ENST00000390940 113 ntBASIC6.34□□□□□ -1.39
HPS1Q92902 RNU6-493P-201ENST00000391321 108 ntBASIC6.34□□□□□ -1.39
HPS1Q92902 AL034374.1-201ENST00000406329 351 ntBASIC6.34□□□□□ -1.39
HPS1Q92902 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HPS1Q92902 RNU4-46P-201ENST00000410818 138 ntBASIC6.34□□□□□ -1.39
HPS1Q92902 RN7SKP30-201ENST00000411373 334 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms