Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC131238.1-201ENST00000617135 328 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 LINC00901.1-201ENST00000617252 152 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 MIR8069-2-201ENST00000621412 86 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 AC124312.6-202ENST00000623624 418 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.58□□□□□ -1.52
ERCC4Q92889 ATE1-AS1-202ENST00000636460 506 ntBASIC5.58□□□□□ -1.52
ERCC4Q92889 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC4Q92889 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC4Q92889 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC4Q92889 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC4Q92889 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ERCC4Q92889 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC4Q92889 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.58□□□□□ -1.52
ERCC4Q92889 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ERCC4Q92889 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC4Q92889 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC4Q92889 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC4Q92889 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 OR52B1P-201ENST00000316506 909 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC4Q92889 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 RNU6-582P-201ENST00000362989 107 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 TMSB4XP8-201ENST00000402089 135 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 AL139098.1-201ENST00000407291 389 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 FCF1P9-201ENST00000412546 282 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 AL450992.3-201ENST00000413192 568 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.57□□□□□ -1.52
ERCC4Q92889 TMSB4XP6-201ENST00000415187 135 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.57□□□□□ -1.52
ERCC4Q92889 RGS17P1-201ENST00000423358 553 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 TMSB4XP1-201ENST00000424567 135 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC4Q92889 LARP1BP3-201ENST00000437229 869 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC4Q92889 MTND1P1-201ENST00000445453 368 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC4Q92889 AC112206.1-201ENST00000468416 477 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 MTND2P33-201ENST00000506452 1031 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 AC093281.2-201ENST00000510153 597 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 AC109471.1-201ENST00000511631 612 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 RNA5SP34-201ENST00000516887 130 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.57□□□□□ -1.52
ERCC4Q92889 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
ERCC4Q92889 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ERCC4Q92889 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC4Q92889 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 AL049779.2-201ENST00000553847 315 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC4Q92889 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ERCC4Q92889 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC4Q92889 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.57□□□□□ -1.52
ERCC4Q92889 AL512347.1-201ENST00000566420 503 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 AL390816.3-201ENST00000604527 1066 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 NDUFA8P1-201ENST00000605525 367 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 AL160394.1-201ENST00000624765 724 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 AC068137.3-201ENST00000639191 341 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 AC073869.6-201ENST00000640656 341 ntBASIC5.57□□□□□ -1.52
ERCC4Q92889 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC4Q92889 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.57□□□□□ -1.52
ERCC4Q92889 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC4Q92889 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
ERCC4Q92889 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.57□□□□□ -1.52
ERCC4Q92889 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ERCC4Q92889 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ERCC4Q92889 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC4Q92889 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.56□□□□□ -1.52
ERCC4Q92889 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
ERCC4Q92889 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.56□□□□□ -1.52
ERCC4Q92889 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC4Q92889 SNORA73.1-201ENST00000363107 205 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
ERCC4Q92889 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC4Q92889 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ERCC4Q92889 OR52E6-202ENST00000379946 954 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 RNU6-317P-201ENST00000384031 107 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AL357515.1-201ENST00000402967 542 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 MIR1178-201ENST00000408396 91 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.56□□□□□ -1.52
ERCC4Q92889 SLC35E1P1-201ENST00000419313 864 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AC004448.2-201ENST00000422360 586 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.56□□□□□ -1.52
ERCC4Q92889 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.56□□□□□ -1.52
ERCC4Q92889 MTATP6P13-201ENST00000438531 667 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AL031667.1-201ENST00000440222 725 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.56□□□□□ -1.52
ERCC4Q92889 RPS27AP15-201ENST00000447672 466 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 RPL7AP52-201ENST00000458096 790 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 AC010307.1-201ENST00000467206 836 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 RN7SL30P-201ENST00000488416 306 ntBASIC5.56□□□□□ -1.52
ERCC4Q92889 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms