Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 CASC19-228ENST00000641414 1684 ntBASIC6.68□□□□□ -1.34
RNF135Q8IUD6 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF135Q8IUD6 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC005618.1-201ENST00000606901 3148 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 MFSD8-219ENST00000641228 2559 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 MIR92A2-201ENST00000385299 75 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AL713922.1-201ENST00000416477 747 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC012065.2-201ENST00000421295 375 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC012075.1-201ENST00000436549 580 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC023141.3-201ENST00000436698 278 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 SUMO1P3-201ENST00000439961 304 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC114495.1-201ENST00000441274 436 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AL163193.1-201ENST00000444895 788 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AL354710.1-201ENST00000453641 246 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 RN7SL610P-201ENST00000463845 291 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC114781.3-201ENST00000512083 142 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC114797.1-201ENST00000514003 728 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC105417.1-201ENST00000514691 285 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 SNORD27.1-201ENST00000516319 72 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 Y_RNA.720-201ENST00000517166 92 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 SNORA25.17-201ENST00000517184 124 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AP003396.4-201ENST00000527574 265 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AL390726.5-202ENST00000564800 256 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC092121.1-201ENST00000569452 202 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AP001029.3-201ENST00000588063 596 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AL109918.3-201ENST00000603072 338 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 XIAPP1-201ENST00000603162 600 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AL359704.2-201ENST00000604335 521 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AP001330.4-201ENST00000604350 154 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 CYCSP1-201ENST00000604815 315 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC080078.3-201ENST00000605407 463 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC022905.1-201ENST00000503430 3048 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 ANKRD26P2-201ENST00000445530 1710 ntBASIC6.67□□□□□ -1.34
RNF135Q8IUD6 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RNF135Q8IUD6 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC097714.1-201ENST00000511272 1647 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC092724.1-201ENST00000624623 3397 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 SNORA74A-201ENST00000364089 198 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 RNU4-20P-201ENST00000365601 151 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 MIR568-201ENST00000385036 95 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 MIR143-201ENST00000385300 106 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AL583835.1-201ENST00000399570 407 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 RPS20P5-201ENST00000434808 360 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AL035090.1-201ENST00000454835 332 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 RPL23AP64-201ENST00000469465 435 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC006511.1-201ENST00000470614 315 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC055855.1-201ENST00000489563 579 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC083906.1-201ENST00000509298 406 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC005741.1-201ENST00000511094 432 ntBASIC6.66□□□□□ -1.34
RNF135Q8IUD6 AC021146.1-201ENST00000511202 716 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms