Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 SEPT7P7-201ENST00000420492 1301 ntBASIC3.6□□□□□ -1.83
RTL4Q6ZR62 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RTL4Q6ZR62 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 RPL32P23-201ENST00000397237 405 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 MTHFD2P2-201ENST00000407725 247 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 CYCSP19-201ENST00000411715 316 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AC083863.1-201ENST00000438811 231 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AL606490.8-201ENST00000441624 319 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 RANP8-201ENST00000444720 713 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 DNAJC19P1-201ENST00000455312 319 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 CYCSP53-201ENST00000455540 265 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 SNORA70.17-201ENST00000516449 133 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 HIGD1AP18-201ENST00000520730 278 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AC087369.1-201ENST00000520775 996 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 MTND5P21-201ENST00000531961 522 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 NPM1P47-201ENST00000560843 856 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 ZNF192P1-203ENST00000565888 810 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AC006130.2-201ENST00000586202 326 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AC067852.4-201ENST00000590314 478 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 EIF1P6-201ENST00000600054 334 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AC005344.1-201ENST00000613391 459 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AC092628.2-201ENST00000622492 339 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 AC119674.1-212ENST00000641155 993 ntBASIC3.59□□□□□ -1.83
RTL4Q6ZR62 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL4Q6ZR62 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
RTL4Q6ZR62 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.59□□□□□ -1.84
RTL4Q6ZR62 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RTL4Q6ZR62 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 MIR421-201ENST00000365696 85 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 HMGN2P8-201ENST00000391458 268 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 SNORA3.3-201ENST00000408712 125 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 RNU6ATAC-201ENST00000408749 126 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 RPL26P37-201ENST00000411983 438 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 PRELID3BP11-201ENST00000414230 479 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AC007390.1-201ENST00000415722 356 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 NDUFA5P10-201ENST00000432147 357 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AC007389.2-201ENST00000434630 306 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 RRM2P4-201ENST00000441721 562 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AC005229.2-201ENST00000456995 399 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AC007688.1-201ENST00000475592 759 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 RPL7P24-201ENST00000493052 752 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AC023050.1-201ENST00000498198 304 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AC023141.12-201ENST00000512399 199 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 RNU6-551P-201ENST00000516661 103 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 RNU6-1308P-201ENST00000516817 103 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AC006270.2-201ENST00000578523 652 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 FP236240.3-201ENST00000623061 327 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AL356863.1-201ENST00000623378 1080 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 LINC00561-201ENST00000565815 2738 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 GABPAP-201ENST00000419271 1356 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AL592494.2-201ENST00000425455 1548 ntBASIC3.58□□□□□ -1.84
RTL4Q6ZR62 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTL4Q6ZR62 AL161912.2-201ENST00000565707 3007 ntBASIC3.57□□□□□ -1.84
RTL4Q6ZR62 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.57□□□□□ -1.84
RTL4Q6ZR62 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTL4Q6ZR62 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTL4Q6ZR62 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTL4Q6ZR62 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RTL4Q6ZR62 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTL4Q6ZR62 OR4A15-201ENST00000314706 1035 ntBASIC3.57□□□□□ -1.84
RTL4Q6ZR62 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RTL4Q6ZR62 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTL4Q6ZR62 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
RTL4Q6ZR62 MIR30B-201ENST00000384850 88 ntBASIC3.57□□□□□ -1.84
RTL4Q6ZR62 MIR7-1-201ENST00000384871 110 ntBASIC3.57□□□□□ -1.84
RTL4Q6ZR62 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTL4Q6ZR62 AL590704.1-201ENST00000402856 794 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms