Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC010608.2-201ENST00000624830 470 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AC019080.5-201ENST00000624891 757 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.17□□□□□ -1.9
AP3S2P59780 MIR4302-201ENST00000638058 60 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP3S2P59780 AC087565.3-202ENST00000642085 1603 ntBASIC3.17□□□□□ -1.9
AP3S2P59780 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
AP3S2P59780 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.17□□□□□ -1.9
AP3S2P59780 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.17□□□□□ -1.9
AP3S2P59780 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP3S2P59780 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.17□□□□□ -1.9
AP3S2P59780 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP3S2P59780 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
AP3S2P59780 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
AP3S2P59780 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
AP3S2P59780 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
AP3S2P59780 IGKV7-3-201ENST00000357453 298 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.16□□□□□ -1.9
AP3S2P59780 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
AP3S2P59780 AP002088.1-201ENST00000382740 395 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 RNU6-185P-201ENST00000384421 107 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
AP3S2P59780 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
AP3S2P59780 AL109941.1-201ENST00000401925 229 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 AL355379.1-201ENST00000405542 640 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 RNU2-71P-201ENST00000411395 189 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 RPL26P37-201ENST00000411983 438 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3S2P59780 AC245291.1-201ENST00000419501 328 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 AC244098.2-201ENST00000422068 99 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.16□□□□□ -1.9
AP3S2P59780 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.16□□□□□ -1.9
AP3S2P59780 NDUFA5P10-201ENST00000432147 357 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 NDUFB1P1-201ENST00000435191 180 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 HIGD1AP11-201ENST00000438361 280 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
AP3S2P59780 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.16□□□□□ -1.9
AP3S2P59780 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.16□□□□□ -1.9
AP3S2P59780 AC125238.1-201ENST00000448842 249 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
AP3S2P59780 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3S2P59780 RPS4XP2-201ENST00000458402 793 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 AC096992.1-201ENST00000459808 709 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.16□□□□□ -1.9
AP3S2P59780 RPS3AP6-201ENST00000484430 795 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.16□□□□□ -1.9
AP3S2P59780 MTND4LP22-201ENST00000508209 276 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 RN7SKP277-201ENST00000516895 283 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3S2P59780 OR8G5-201ENST00000524943 1041 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 YPEL5P3-201ENST00000547227 352 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3S2P59780 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3S2P59780 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
AP3S2P59780 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
AP3S2P59780 MAPK10-362ENST00000641864 4484 ntBASIC3.16□□□□□ -1.9
AP3S2P59780 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.16□□□□□ -1.9
AP3S2P59780 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
AP3S2P59780 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
AP3S2P59780 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
AP3S2P59780 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
AP3S2P59780 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
AP3S2P59780 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
AP3S2P59780 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
AP3S2P59780 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
AP3S2P59780 RPL7P26-201ENST00000333817 754 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.15□□□□□ -1.91
AP3S2P59780 RNA5SP383-201ENST00000362934 120 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 RNA5SP42-201ENST00000364278 115 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
AP3S2P59780 AL161909.1-201ENST00000397390 712 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 RPS3AP23-201ENST00000401762 784 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 RNA5SP31-201ENST00000411144 127 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.15□□□□□ -1.91
AP3S2P59780 RPS7P13-201ENST00000413955 498 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 AC093578.1-201ENST00000415219 368 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
AP3S2P59780 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
AP3S2P59780 Z97055.1-201ENST00000419730 712 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.15□□□□□ -1.91
AP3S2P59780 FAR1P1-201ENST00000427163 934 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 PSMA2P3-201ENST00000429685 675 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
AP3S2P59780 MTCO1P45-201ENST00000431457 267 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 VDAC1P3-201ENST00000434069 851 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.15□□□□□ -1.91
AP3S2P59780 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.15□□□□□ -1.91
AP3S2P59780 AL590399.6-201ENST00000446396 307 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 RPL7P52-201ENST00000449200 742 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 SSXP4-201ENST00000451349 245 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 snoU13.1-201ENST00000459157 104 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 AC007688.1-201ENST00000475592 759 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.15□□□□□ -1.91
AP3S2P59780 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.15□□□□□ -1.91
AP3S2P59780 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.15□□□□□ -1.91
AP3S2P59780 IGKV3D-34-201ENST00000522638 302 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 MTCYBP41-201ENST00000528913 1123 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 AC006518.1-201ENST00000541449 943 ntBASIC3.15□□□□□ -1.91
AP3S2P59780 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.15□□□□□ -1.91
AP3S2P59780 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms