Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SUMO3P55854 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SUMO3P55854 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SUMO3P55854 RNY3P10-201ENST00000384764 102 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AL031679.1-201ENST00000400616 525 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 UBTFL3-201ENST00000418934 1024 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC012065.2-201ENST00000421295 375 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC006366.1-201ENST00000422002 759 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 MTCO2P5-201ENST00000422621 426 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AL355433.1-201ENST00000422804 300 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.68□□□□□ -1.66
SUMO3P55854 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 AL589823.1-201ENST00000429577 183 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.68□□□□□ -1.66
SUMO3P55854 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 MUPP-201ENST00000438111 566 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 HSPE1P28-201ENST00000443139 211 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 KNOP1P3-201ENST00000446933 426 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC004980.3-201ENST00000447046 365 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 ST13P20-201ENST00000447996 1065 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 RN7SL443P-201ENST00000464331 290 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC009127.1-201ENST00000467090 155 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 RPS26P39-201ENST00000469206 341 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC017015.1-201ENST00000477387 286 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 UBTFL6-201ENST00000477929 1024 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.68□□□□□ -1.66
SUMO3P55854 RN7SL441P-201ENST00000492388 296 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC106872.3-201ENST00000495104 446 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC072052.1-201ENST00000496556 306 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.68□□□□□ -1.66
SUMO3P55854 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 AC109458.1-201ENST00000508858 316 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC024589.1-201ENST00000512207 263 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.68□□□□□ -1.66
SUMO3P55854 MTCO2P32-201ENST00000514865 403 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 RNA5SP230-201ENST00000517039 122 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.68□□□□□ -1.66
SUMO3P55854 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.68□□□□□ -1.66
SUMO3P55854 COX6CP8-201ENST00000522620 226 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.68□□□□□ -1.66
SUMO3P55854 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.68□□□□□ -1.66
SUMO3P55854 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.68□□□□□ -1.66
SUMO3P55854 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.68□□□□□ -1.66
SUMO3P55854 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 AC091489.2-201ENST00000566263 604 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 MIR4489-201ENST00000578869 62 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.68□□□□□ -1.66
SUMO3P55854 AC083760.1-201ENST00000589621 670 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.68□□□□□ -1.66
SUMO3P55854 YWHAQP7-201ENST00000603536 658 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AL451086.1-201ENST00000605596 223 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC090186.1-201ENST00000605991 572 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.68□□□□□ -1.66
SUMO3P55854 AC097468.3-201ENST00000607956 456 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AC239868.4-201ENST00000608318 671 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 RPSAP73-201ENST00000614820 330 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 MIR6729-201ENST00000618194 65 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 AL445264.1-201ENST00000621719 171 ntBASIC4.68□□□□□ -1.66
SUMO3P55854 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SUMO3P55854 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.68□□□□□ -1.66
SUMO3P55854 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
SUMO3P55854 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.68□□□□□ -1.66
SUMO3P55854 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
SUMO3P55854 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SUMO3P55854 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 ZNF33CP-201ENST00000432492 2030 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AC112198.2-201ENST00000426589 6996 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
SUMO3P55854 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SUMO3P55854 AC008549.2-201ENST00000333482 706 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SUMO3P55854 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.67□□□□□ -1.66
SUMO3P55854 RNU6-730P-201ENST00000383954 104 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AC025750.1-201ENST00000399891 379 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 MIR1305-201ENST00000408300 86 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 RN7SKP229-201ENST00000410465 302 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.67□□□□□ -1.66
SUMO3P55854 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.67□□□□□ -1.66
SUMO3P55854 PGBD4P8-201ENST00000412993 562 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.67□□□□□ -1.66
SUMO3P55854 COX6CP17-201ENST00000421389 185 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.67□□□□□ -1.66
SUMO3P55854 MTCO2P34-201ENST00000421994 607 ntBASIC4.67□□□□□ -1.66
SUMO3P55854 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms