Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH6P55285 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH6P55285 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.89□□□□□ -1.79
CDH6P55285 AC245128.3-201ENST00000594721 748 ntBASIC3.89□□□□□ -1.79
CDH6P55285 VN1R85P-201ENST00000601587 426 ntBASIC3.89□□□□□ -1.79
CDH6P55285 AC024941.1-201ENST00000612250 334 ntBASIC3.89□□□□□ -1.79
CDH6P55285 CDRT1-208ENST00000630868 794 ntBASIC3.89□□□□□ -1.79
CDH6P55285 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH6P55285 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDH6P55285 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH6P55285 AC138393.1-206ENST00000540997 1886 ntBASIC3.89□□□□□ -1.79
CDH6P55285 AC026951.1-201ENST00000559530 2459 ntBASIC3.89□□□□□ -1.79
CDH6P55285 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH6P55285 FAM35DP-201ENST00000323387 2712 ntBASIC3.89□□□□□ -1.79
CDH6P55285 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH6P55285 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH6P55285 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH6P55285 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH6P55285 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH6P55285 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH6P55285 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH6P55285 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.88□□□□□ -1.79
CDH6P55285 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH6P55285 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH6P55285 RNA5SP515-201ENST00000364570 118 ntBASIC3.88□□□□□ -1.79
CDH6P55285 SNORA57.1-201ENST00000391227 145 ntBASIC3.88□□□□□ -1.79
CDH6P55285 SOD2P1-201ENST00000396543 562 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AC004022.2-201ENST00000413824 193 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH6P55285 EIF2S2P3-201ENST00000428356 999 ntBASIC3.88□□□□□ -1.79
CDH6P55285 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH6P55285 USP9YP7-201ENST00000436723 430 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH6P55285 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH6P55285 USP9YP32-201ENST00000452432 430 ntBASIC3.88□□□□□ -1.79
CDH6P55285 RPL37P3-201ENST00000456825 293 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AC018635.1-201ENST00000468292 1030 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AC025459.1-201ENST00000504072 156 ntBASIC3.88□□□□□ -1.79
CDH6P55285 MTATP6P22-201ENST00000507369 598 ntBASIC3.88□□□□□ -1.79
CDH6P55285 IGKV2-36-201ENST00000519999 223 ntBASIC3.88□□□□□ -1.79
CDH6P55285 HMGB1P46-201ENST00000520062 610 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH6P55285 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH6P55285 AC099489.2-201ENST00000574976 260 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH6P55285 AP001180.3-201ENST00000582221 145 ntBASIC3.88□□□□□ -1.79
CDH6P55285 PCNAP1-202ENST00000595299 752 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AL163642.2-201ENST00000604722 1019 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AC242628.1-201ENST00000606810 391 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AC005344.1-201ENST00000613391 459 ntBASIC3.88□□□□□ -1.79
CDH6P55285 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.88□□□□□ -1.79
CDH6P55285 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH6P55285 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CDH6P55285 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH6P55285 DCAF13P3-201ENST00000561147 1334 ntBASIC3.88□□□□□ -1.79
CDH6P55285 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH6P55285 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
CDH6P55285 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH6P55285 MAPK10-372ENST00000641954 3413 ntBASIC3.88□□□□□ -1.79
CDH6P55285 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH6P55285 AC024560.2-201ENST00000507981 1497 ntBASIC3.87□□□□□ -1.79
CDH6P55285 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CDH6P55285 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH6P55285 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH6P55285 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH6P55285 Z86062.1-201ENST00000406773 777 ntBASIC3.87□□□□□ -1.79
CDH6P55285 TCEA1P4-201ENST00000415066 844 ntBASIC3.87□□□□□ -1.79
CDH6P55285 AC114814.2-201ENST00000419195 485 ntBASIC3.87□□□□□ -1.79
CDH6P55285 TCEA1P2-201ENST00000420496 906 ntBASIC3.87□□□□□ -1.79
CDH6P55285 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH6P55285 RPL7P2-201ENST00000427639 268 ntBASIC3.87□□□□□ -1.79
CDH6P55285 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH6P55285 PPIAP17-201ENST00000438507 471 ntBASIC3.87□□□□□ -1.79
CDH6P55285 MTCO3P20-201ENST00000454926 688 ntBASIC3.87□□□□□ -1.79
CDH6P55285 RPS20P21-201ENST00000466859 343 ntBASIC3.87□□□□□ -1.79
CDH6P55285 AC111193.1-201ENST00000504097 155 ntBASIC3.87□□□□□ -1.79
CDH6P55285 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH6P55285 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.87□□□□□ -1.79
CDH6P55285 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH6P55285 NDUFB4P9-201ENST00000511646 388 ntBASIC3.87□□□□□ -1.79
CDH6P55285 RN7SKP141-201ENST00000516167 338 ntBASIC3.87□□□□□ -1.79
CDH6P55285 AC008011.1-201ENST00000545989 227 ntBASIC3.87□□□□□ -1.79
CDH6P55285 AL121594.4-201ENST00000556211 1196 ntBASIC3.87□□□□□ -1.79
CDH6P55285 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.87□□□□□ -1.79
CDH6P55285 AC087499.8-201ENST00000578406 226 ntBASIC3.87□□□□□ -1.79
CDH6P55285 AC099676.1-201ENST00000608886 657 ntBASIC3.87□□□□□ -1.79
CDH6P55285 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH6P55285 AC099669.2-201ENST00000616549 437 ntBASIC3.87□□□□□ -1.79
CDH6P55285 U6.48-201ENST00000618523 106 ntBASIC3.87□□□□□ -1.79
CDH6P55285 AC004943.3-201ENST00000624116 600 ntBASIC3.87□□□□□ -1.79
CDH6P55285 AC020978.9-201ENST00000624380 1141 ntBASIC3.87□□□□□ -1.79
CDH6P55285 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH6P55285 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.87□□□□□ -1.79
CDH6P55285 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.87□□□□□ -1.79
CDH6P55285 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CDH6P55285 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH6P55285 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CDH6P55285 AP004289.2-201ENST00000444413 1457 ntBASIC3.86□□□□□ -1.79
CDH6P55285 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms