Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 OR4U1P-201ENST00000554958 912 ntBASIC4.33□□□□□ -1.72
VCPP55072 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.33□□□□□ -1.72
VCPP55072 AC007599.1-201ENST00000568688 1174 ntBASIC4.33□□□□□ -1.72
VCPP55072 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.33□□□□□ -1.72
VCPP55072 MIR5195-201ENST00000583555 115 ntBASIC4.33□□□□□ -1.72
VCPP55072 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.33□□□□□ -1.72
VCPP55072 AC083899.3-201ENST00000603413 594 ntBASIC4.33□□□□□ -1.72
VCPP55072 AC005000.2-201ENST00000605468 310 ntBASIC4.33□□□□□ -1.72
VCPP55072 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.33□□□□□ -1.72
VCPP55072 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.33□□□□□ -1.72
VCPP55072 AC020923.1-201ENST00000624021 917 ntBASIC4.33□□□□□ -1.72
VCPP55072 AC024023.1-201ENST00000624530 922 ntBASIC4.33□□□□□ -1.72
VCPP55072 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.33□□□□□ -1.72
VCPP55072 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.33□□□□□ -1.72
VCPP55072 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VCPP55072 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VCPP55072 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VCPP55072 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.33□□□□□ -1.72
VCPP55072 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VCPP55072 MTCO1P14-201ENST00000441695 1559 ntBASIC4.32□□□□□ -1.72
VCPP55072 AL353743.4-201ENST00000422653 1547 ntBASIC4.32□□□□□ -1.72
VCPP55072 XIAPP3-201ENST00000312918 795 ntBASIC4.32□□□□□ -1.72
VCPP55072 OR11H4-201ENST00000315409 1082 ntBASIC4.32□□□□□ -1.72
VCPP55072 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.32□□□□□ -1.72
VCPP55072 ATP5F1P4-201ENST00000397288 746 ntBASIC4.32□□□□□ -1.72
VCPP55072 AL356057.1-202ENST00000402263 756 ntBASIC4.32□□□□□ -1.72
VCPP55072 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.32□□□□□ -1.72
VCPP55072 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.32□□□□□ -1.72
VCPP55072 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VCPP55072 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.32□□□□□ -1.72
VCPP55072 RPL23AP46-201ENST00000438548 490 ntBASIC4.32□□□□□ -1.72
VCPP55072 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VCPP55072 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.32□□□□□ -1.72
VCPP55072 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.32□□□□□ -1.72
VCPP55072 AC092691.2-201ENST00000461787 803 ntBASIC4.32□□□□□ -1.72
VCPP55072 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.32□□□□□ -1.72
VCPP55072 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.32□□□□□ -1.72
VCPP55072 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.32□□□□□ -1.72
VCPP55072 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.32□□□□□ -1.72
VCPP55072 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.32□□□□□ -1.72
VCPP55072 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.32□□□□□ -1.72
VCPP55072 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.32□□□□□ -1.72
VCPP55072 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
VCPP55072 NOP56P3-201ENST00000549457 385 ntBASIC4.32□□□□□ -1.72
VCPP55072 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.32□□□□□ -1.72
VCPP55072 AC106785.3-201ENST00000564064 847 ntBASIC4.32□□□□□ -1.72
VCPP55072 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.32□□□□□ -1.72
VCPP55072 MIR548Y-201ENST00000582739 110 ntBASIC4.32□□□□□ -1.72
VCPP55072 AC005255.1-201ENST00000593748 216 ntBASIC4.32□□□□□ -1.72
VCPP55072 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.32□□□□□ -1.72
VCPP55072 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.32□□□□□ -1.72
VCPP55072 AC233309.1-201ENST00000619522 751 ntBASIC4.32□□□□□ -1.72
VCPP55072 CR392039.4-201ENST00000624968 501 ntBASIC4.32□□□□□ -1.72
VCPP55072 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VCPP55072 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VCPP55072 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.32□□□□□ -1.72
VCPP55072 CASC19-261ENST00000641853 1638 ntBASIC4.32□□□□□ -1.72
VCPP55072 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VCPP55072 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VCPP55072 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.31□□□□□ -1.72
VCPP55072 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.31□□□□□ -1.72
VCPP55072 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.31□□□□□ -1.72
VCPP55072 RNU6-317P-201ENST00000384031 107 ntBASIC4.31□□□□□ -1.72
VCPP55072 JKAMPP1-201ENST00000413804 919 ntBASIC4.31□□□□□ -1.72
VCPP55072 RPS12P23-201ENST00000419579 400 ntBASIC4.31□□□□□ -1.72
VCPP55072 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.31□□□□□ -1.72
VCPP55072 HMGN2P31-201ENST00000432430 273 ntBASIC4.31□□□□□ -1.72
VCPP55072 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.31□□□□□ -1.72
VCPP55072 HMGB1P26-201ENST00000452520 628 ntBASIC4.31□□□□□ -1.72
VCPP55072 AC093663.2-201ENST00000484625 313 ntBASIC4.31□□□□□ -1.72
VCPP55072 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.31□□□□□ -1.72
VCPP55072 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.31□□□□□ -1.72
VCPP55072 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.31□□□□□ -1.72
VCPP55072 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.31□□□□□ -1.72
VCPP55072 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.31□□□□□ -1.72
VCPP55072 AC023158.1-201ENST00000561632 1025 ntBASIC4.31□□□□□ -1.72
VCPP55072 AC005242.1-201ENST00000585658 438 ntBASIC4.31□□□□□ -1.72
VCPP55072 AC025946.2-201ENST00000603398 234 ntBASIC4.31□□□□□ -1.72
VCPP55072 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.31□□□□□ -1.72
VCPP55072 AC025016.1-201ENST00000616746 682 ntBASIC4.31□□□□□ -1.72
VCPP55072 AL356094.1-201ENST00000624663 1212 ntBASIC4.31□□□□□ -1.72
VCPP55072 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.31□□□□□ -1.72
VCPP55072 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VCPP55072 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VCPP55072 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VCPP55072 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.31□□□□□ -1.72
VCPP55072 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
VCPP55072 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VCPP55072 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VCPP55072 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VCPP55072 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VCPP55072 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.31□□□□□ -1.72
VCPP55072 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VCPP55072 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VCPP55072 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VCPP55072 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
VCPP55072 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
VCPP55072 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VCPP55072 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.3□□□□□ -1.72
VCPP55072 RNA5SP72-201ENST00000364442 117 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms