Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC011276.1-201ENST00000469688 323 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 RN7SL860P-201ENST00000473738 223 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AC113347.3-201ENST00000509113 148 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AC093840.1-201ENST00000511599 336 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AC010285.3-201ENST00000511668 676 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 RNA5SP497-201ENST00000516081 97 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.37□□□□□ -1.71
CLCNKAP51800 DEFB109D-201ENST00000529497 240 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.37□□□□□ -1.71
CLCNKAP51800 AC023050.2-201ENST00000544968 387 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AC090751.1-201ENST00000566966 267 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 MIR4458-201ENST00000578872 75 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.37□□□□□ -1.71
CLCNKAP51800 ELOCP28-201ENST00000590044 317 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.37□□□□□ -1.71
CLCNKAP51800 AL592148.2-201ENST00000612210 372 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLCNKAP51800 SNX18P1Y-201ENST00000616231 511 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 MIR6810-201ENST00000622701 70 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AC091905.2-201ENST00000623143 306 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 AP000843.1-201ENST00000624880 701 ntBASIC4.37□□□□□ -1.71
CLCNKAP51800 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCNKAP51800 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.37□□□□□ -1.71
CLCNKAP51800 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.37□□□□□ -1.71
CLCNKAP51800 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.37□□□□□ -1.71
CLCNKAP51800 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCNKAP51800 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLCNKAP51800 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLCNKAP51800 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.37□□□□□ -1.71
CLCNKAP51800 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCNKAP51800 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CLCNKAP51800 AL136964.1-201ENST00000622038 2990 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCNKAP51800 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCNKAP51800 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCNKAP51800 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCNKAP51800 NACA3P-201ENST00000359690 648 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 RNU1-130P-201ENST00000363930 160 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 RNU6-707P-201ENST00000364647 95 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 RNU1-63P-201ENST00000383902 164 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 RNU6-413P-201ENST00000384115 107 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 LAP3P1-201ENST00000403648 294 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AL078604.1-201ENST00000404609 466 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AL590084.1-201ENST00000407885 387 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 SNORA11F-201ENST00000408237 128 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 RNU4-25P-201ENST00000410569 230 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 RAB28P1-201ENST00000411517 641 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCNKAP51800 RPL30P3-201ENST00000424262 333 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AL009174.1-201ENST00000426577 416 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCNKAP51800 DYNLL1P7-201ENST00000429273 258 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 RPL23AP25-201ENST00000430973 463 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCNKAP51800 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCNKAP51800 AC092809.1-201ENST00000441469 474 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 FGF7P5-201ENST00000441829 291 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.36□□□□□ -1.71
CLCNKAP51800 VN1R32P-201ENST00000452234 905 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCNKAP51800 DHFRP3-201ENST00000455595 559 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCNKAP51800 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCNKAP51800 RPL23AP65-201ENST00000475608 468 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 S100A11P1-201ENST00000477525 312 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.36□□□□□ -1.71
CLCNKAP51800 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCNKAP51800 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCNKAP51800 AC005351.1-201ENST00000511152 786 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.36□□□□□ -1.71
CLCNKAP51800 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCNKAP51800 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCNKAP51800 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCNKAP51800 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCNKAP51800 ZNF321P-202ENST00000550843 495 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCNKAP51800 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.36□□□□□ -1.71
CLCNKAP51800 AC009094.1-201ENST00000564443 426 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCNKAP51800 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.36□□□□□ -1.71
CLCNKAP51800 RPL7P50-201ENST00000600588 727 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AC090181.2-201ENST00000602975 672 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AL353778.1-201ENST00000603149 408 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AC079587.1-201ENST00000603846 277 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCNKAP51800 AC091304.6-201ENST00000619761 202 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 CR392039.4-201ENST00000624968 501 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AC017037.3-201ENST00000625016 472 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 AC087821.2-201ENST00000637086 450 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.36□□□□□ -1.71
CLCNKAP51800 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCNKAP51800 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCNKAP51800 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLCNKAP51800 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCNKAP51800 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLCNKAP51800 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.36□□□□□ -1.71
CLCNKAP51800 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCNKAP51800 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.36□□□□□ -1.71
CLCNKAP51800 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLCNKAP51800 AC017104.4-201ENST00000636283 1592 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms