Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.51□□□□□ -1.85
BRCA2P51587 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
BRCA2P51587 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
BRCA2P51587 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
BRCA2P51587 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
BRCA2P51587 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.51□□□□□ -1.85
BRCA2P51587 AL031736.2-201ENST00000426573 787 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 AL513328.1-201ENST00000446460 224 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.51□□□□□ -1.85
BRCA2P51587 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.51□□□□□ -1.85
BRCA2P51587 RN7SKP244-201ENST00000516513 307 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC3.51□□□□□ -1.85
BRCA2P51587 AP000926.4-201ENST00000527351 454 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.51□□□□□ -1.85
BRCA2P51587 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC3.51□□□□□ -1.85
BRCA2P51587 EIF1P6-201ENST00000600054 334 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
BRCA2P51587 SMC4P1-201ENST00000414479 527 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 AL357552.1-201ENST00000445254 415 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.51□□□□□ -1.85
BRCA2P51587 AP002812.4-201ENST00000532139 286 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 AP000873.5-201ENST00000533906 236 ntBASIC3.51□□□□□ -1.85
BRCA2P51587 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
BRCA2P51587 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRCA2P51587 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRCA2P51587 RPS4XP6-201ENST00000477670 797 ntBASIC3.5□□□□□ -1.85
BRCA2P51587 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRCA2P51587 AC021146.3-201ENST00000511911 260 ntBASIC3.5□□□□□ -1.85
BRCA2P51587 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.5□□□□□ -1.85
BRCA2P51587 MRPS35P3-201ENST00000603189 709 ntBASIC3.5□□□□□ -1.85
BRCA2P51587 AL031658.2-201ENST00000616850 651 ntBASIC3.5□□□□□ -1.85
BRCA2P51587 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRCA2P51587 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.5□□□□□ -1.85
BRCA2P51587 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRCA2P51587 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC3.5□□□□□ -1.85
BRCA2P51587 APOOP4-201ENST00000513530 597 ntBASIC3.5□□□□□ -1.85
BRCA2P51587 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.5□□□□□ -1.85
BRCA2P51587 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.5□□□□□ -1.85
BRCA2P51587 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC3.5□□□□□ -1.85
BRCA2P51587 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRCA2P51587 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRCA2P51587 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
BRCA2P51587 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRCA2P51587 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.5□□□□□ -1.85
BRCA2P51587 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
BRCA2P51587 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.5□□□□□ -1.85
BRCA2P51587 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRCA2P51587 GNG5P5-201ENST00000420444 220 ntBASIC3.5□□□□□ -1.85
BRCA2P51587 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.5□□□□□ -1.85
BRCA2P51587 FTH1P6-201ENST00000430768 320 ntBASIC3.5□□□□□ -1.85
BRCA2P51587 RPS20P22-201ENST00000473700 357 ntBASIC3.5□□□□□ -1.85
BRCA2P51587 AL121766.1-201ENST00000547436 487 ntBASIC3.5□□□□□ -1.85
BRCA2P51587 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BRCA2P51587 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
BRCA2P51587 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.49□□□□□ -1.85
BRCA2P51587 AC010168.2-201ENST00000562691 5428 ntBASIC3.49□□□□□ -1.85
BRCA2P51587 FTLP19-201ENST00000433300 394 ntBASIC3.49□□□□□ -1.85
BRCA2P51587 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.49□□□□□ -1.85
BRCA2P51587 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BRCA2P51587 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
BRCA2P51587 OR51C1P-202ENST00000641159 1444 ntBASIC3.49□□□□□ -1.85
BRCA2P51587 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BRCA2P51587 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
BRCA2P51587 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
BRCA2P51587 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
BRCA2P51587 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC3.49□□□□□ -1.85
BRCA2P51587 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.49□□□□□ -1.85
BRCA2P51587 RPSAP41-201ENST00000439695 860 ntBASIC3.49□□□□□ -1.85
BRCA2P51587 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.49□□□□□ -1.85
BRCA2P51587 DEFB122-202ENST00000569013 197 ntBASIC3.49□□□□□ -1.85
BRCA2P51587 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.49□□□□□ -1.85
BRCA2P51587 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BRCA2P51587 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
BRCA2P51587 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
BRCA2P51587 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BRCA2P51587 MIR512-1-201ENST00000384913 84 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 ETF1P3-201ENST00000430422 1160 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.48□□□□□ -1.85
BRCA2P51587 FCF1P3-201ENST00000496394 590 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.48□□□□□ -1.85
BRCA2P51587 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
BRCA2P51587 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.48□□□□□ -1.85
BRCA2P51587 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BRCA2P51587 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BRCA2P51587 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BRCA2P51587 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BRCA2P51587 IPO8P1-201ENST00000455509 3109 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
BRCA2P51587 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
BRCA2P51587 AC073325.2-201ENST00000339545 159 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 AC017037.1-201ENST00000508460 471 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 RNA5SP367-201ENST00000516557 118 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC3.48□□□□□ -1.85
BRCA2P51587 AC007336.1-201ENST00000576365 3828 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BRCA2P51587 FAM133CP-201ENST00000332869 704 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 AL353692.2-201ENST00000407054 335 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 RN7SKP220-201ENST00000410611 288 ntBASIC3.48□□□□□ -1.85
BRCA2P51587 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms