Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 OR4F13P-201ENST00000428478 931 ntBASIC3.6□□□□□ -1.83
RPA3P35244 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.6□□□□□ -1.83
RPA3P35244 RPS3AP46-201ENST00000448352 682 ntBASIC3.6□□□□□ -1.83
RPA3P35244 RNU7-27P-201ENST00000459281 62 ntBASIC3.6□□□□□ -1.83
RPA3P35244 AL133162.1-201ENST00000463228 453 ntBASIC3.6□□□□□ -1.83
RPA3P35244 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RPA3P35244 CYCSP20-201ENST00000473154 315 ntBASIC3.6□□□□□ -1.83
RPA3P35244 HMGN1P11-201ENST00000508668 303 ntBASIC3.6□□□□□ -1.83
RPA3P35244 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.6□□□□□ -1.83
RPA3P35244 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.6□□□□□ -1.83
RPA3P35244 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.6□□□□□ -1.83
RPA3P35244 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.6□□□□□ -1.83
RPA3P35244 MIR4458-201ENST00000578872 75 ntBASIC3.6□□□□□ -1.83
RPA3P35244 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.6□□□□□ -1.83
RPA3P35244 MIR5187-201ENST00000583479 76 ntBASIC3.6□□□□□ -1.83
RPA3P35244 AC009303.3-201ENST00000591103 736 ntBASIC3.6□□□□□ -1.83
RPA3P35244 AC006077.1-201ENST00000604746 343 ntBASIC3.6□□□□□ -1.83
RPA3P35244 AL391497.1-201ENST00000608671 547 ntBASIC3.6□□□□□ -1.83
RPA3P35244 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.6□□□□□ -1.83
RPA3P35244 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.6□□□□□ -1.83
RPA3P35244 AP000553.6-201ENST00000641242 118 ntBASIC3.6□□□□□ -1.83
RPA3P35244 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPA3P35244 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RPA3P35244 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RPA3P35244 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
RPA3P35244 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.59□□□□□ -1.83
RPA3P35244 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPA3P35244 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
RPA3P35244 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPA3P35244 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPA3P35244 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPA3P35244 RNU6-244P-201ENST00000391028 104 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AC025750.1-201ENST00000399891 379 ntBASIC3.59□□□□□ -1.83
RPA3P35244 RNU6ATAC-201ENST00000408749 126 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.59□□□□□ -1.83
RPA3P35244 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 AC068533.1-201ENST00000418542 415 ntBASIC3.59□□□□□ -1.83
RPA3P35244 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPA3P35244 RPL31P12-201ENST00000422587 358 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 KCTD10P1-201ENST00000434203 625 ntBASIC3.59□□□□□ -1.83
RPA3P35244 MRPS18BP2-201ENST00000434310 759 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 EXTL2P1-201ENST00000446218 416 ntBASIC3.59□□□□□ -1.83
RPA3P35244 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPA3P35244 VN1R48P-201ENST00000448149 1036 ntBASIC3.59□□□□□ -1.83
RPA3P35244 RPS4XP2-201ENST00000458402 793 ntBASIC3.59□□□□□ -1.83
RPA3P35244 RPL6P9-201ENST00000466502 859 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AC104629.2-201ENST00000468627 598 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 PRELID3BP7-201ENST00000503606 469 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AC034244.2-201ENST00000514668 858 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPA3P35244 AP001636.2-201ENST00000525517 696 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 AC026333.2-201ENST00000542164 106 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.59□□□□□ -1.83
RPA3P35244 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.59□□□□□ -1.83
RPA3P35244 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPA3P35244 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RPA3P35244 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.59□□□□□ -1.83
RPA3P35244 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.59□□□□□ -1.83
RPA3P35244 AC123768.4-201ENST00000616244 701 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AC139769.3-201ENST00000618383 175 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AC116563.2-201ENST00000624751 535 ntBASIC3.59□□□□□ -1.83
RPA3P35244 AC009452.1-201ENST00000640823 606 ntBASIC3.59□□□□□ -1.83
RPA3P35244 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RPA3P35244 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RPA3P35244 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RPA3P35244 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RPA3P35244 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.58□□□□□ -1.84
RPA3P35244 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.58□□□□□ -1.84
RPA3P35244 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 PWAR6-201ENST00000552334 4618 ntBASIC3.58□□□□□ -1.84
RPA3P35244 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 MIR554-201ENST00000384874 96 ntBASIC3.58□□□□□ -1.84
RPA3P35244 U3.39-201ENST00000408569 239 ntBASIC3.58□□□□□ -1.84
RPA3P35244 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.58□□□□□ -1.84
RPA3P35244 TRGV6-201ENST00000417928 299 ntBASIC3.58□□□□□ -1.84
RPA3P35244 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.58□□□□□ -1.84
RPA3P35244 FTH1P6-201ENST00000430768 320 ntBASIC3.58□□□□□ -1.84
RPA3P35244 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.58□□□□□ -1.84
RPA3P35244 TXNP1-201ENST00000441872 371 ntBASIC3.58□□□□□ -1.84
RPA3P35244 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RPA3P35244 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.58□□□□□ -1.84
RPA3P35244 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.58□□□□□ -1.84
RPA3P35244 AC006539.3-201ENST00000454258 129 ntBASIC3.58□□□□□ -1.84
RPA3P35244 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.58□□□□□ -1.84
RPA3P35244 AC010468.1-201ENST00000461022 817 ntBASIC3.58□□□□□ -1.84
RPA3P35244 EIF2S2P4-201ENST00000461070 984 ntBASIC3.58□□□□□ -1.84
RPA3P35244 RPL7P48-201ENST00000461513 746 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms