Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC095057.3-201ENST00000567102 1157 ntBASIC4.88□□□□□ -1.63
CIITAP33076 ATP5F1P7-201ENST00000567330 760 ntBASIC4.88□□□□□ -1.63
CIITAP33076 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.88□□□□□ -1.63
CIITAP33076 KPNA2P3-201ENST00000584190 848 ntBASIC4.88□□□□□ -1.63
CIITAP33076 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.88□□□□□ -1.63
CIITAP33076 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CIITAP33076 VN1R83P-201ENST00000595685 445 ntBASIC4.88□□□□□ -1.63
CIITAP33076 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CIITAP33076 AC009318.3-201ENST00000616916 503 ntBASIC4.88□□□□□ -1.63
CIITAP33076 AC019278.1-201ENST00000623516 479 ntBASIC4.88□□□□□ -1.63
CIITAP33076 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CIITAP33076 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CIITAP33076 AC022031.1-201ENST00000585985 2593 ntBASIC4.87□□□□□ -1.63
CIITAP33076 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.87□□□□□ -1.63
CIITAP33076 ENSAP3-201ENST00000312710 333 ntBASIC4.87□□□□□ -1.63
CIITAP33076 RNU1-14P-201ENST00000362759 152 ntBASIC4.87□□□□□ -1.63
CIITAP33076 SNORD116.1-201ENST00000365628 92 ntBASIC4.87□□□□□ -1.63
CIITAP33076 RNU6-83P-201ENST00000384568 112 ntBASIC4.87□□□□□ -1.63
CIITAP33076 RNA5SP372-201ENST00000390836 115 ntBASIC4.87□□□□□ -1.63
CIITAP33076 ERHP2-201ENST00000402323 299 ntBASIC4.87□□□□□ -1.63
CIITAP33076 EIF4A1P3-201ENST00000411521 244 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.87□□□□□ -1.63
CIITAP33076 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.87□□□□□ -1.63
CIITAP33076 AC009518.2-201ENST00000418056 731 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.87□□□□□ -1.63
CIITAP33076 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.87□□□□□ -1.63
CIITAP33076 COX6CP17-201ENST00000421389 185 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.87□□□□□ -1.63
CIITAP33076 EIF1P3-201ENST00000423841 334 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.87□□□□□ -1.63
CIITAP33076 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.87□□□□□ -1.63
CIITAP33076 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.87□□□□□ -1.63
CIITAP33076 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.87□□□□□ -1.63
CIITAP33076 ABCF2P2-201ENST00000450549 296 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC233982.1-201ENST00000451247 436 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC010618.1-201ENST00000469924 477 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC010683.1-201ENST00000473673 378 ntBASIC4.87□□□□□ -1.63
CIITAP33076 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CIITAP33076 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.87□□□□□ -1.63
CIITAP33076 AC104164.2-201ENST00000496953 495 ntBASIC4.87□□□□□ -1.63
CIITAP33076 ARL4AP1-201ENST00000503220 705 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC034244.1-201ENST00000507687 207 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.87□□□□□ -1.63
CIITAP33076 HMGB1P19-201ENST00000517578 577 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC083923.1-201ENST00000523708 376 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AP003730.1-201ENST00000524605 285 ntBASIC4.87□□□□□ -1.63
CIITAP33076 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CIITAP33076 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.87□□□□□ -1.63
CIITAP33076 AC006064.5-201ENST00000541782 248 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.87□□□□□ -1.63
CIITAP33076 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.87□□□□□ -1.63
CIITAP33076 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.87□□□□□ -1.63
CIITAP33076 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.87□□□□□ -1.63
CIITAP33076 AC027104.1-201ENST00000563702 681 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC136624.4-201ENST00000573044 370 ntBASIC4.87□□□□□ -1.63
CIITAP33076 MIR4716-201ENST00000579628 84 ntBASIC4.87□□□□□ -1.63
CIITAP33076 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.87□□□□□ -1.63
CIITAP33076 AC090948.2-201ENST00000607363 564 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC024257.5-201ENST00000612739 531 ntBASIC4.87□□□□□ -1.63
CIITAP33076 MIR6716-201ENST00000613413 80 ntBASIC4.87□□□□□ -1.63
CIITAP33076 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CIITAP33076 AL023881.1-201ENST00000621088 301 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC078883.4-201ENST00000623218 367 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC004943.3-201ENST00000624116 600 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AL512506.2-201ENST00000624472 458 ntBASIC4.87□□□□□ -1.63
CIITAP33076 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.87□□□□□ -1.63
CIITAP33076 MIR6830-201ENST00000636015 70 ntBASIC4.87□□□□□ -1.63
CIITAP33076 U6.107-201ENST00000637108 79 ntBASIC4.87□□□□□ -1.63
CIITAP33076 AC008013.2-202ENST00000637965 364 ntBASIC4.87□□□□□ -1.63
CIITAP33076 OR52H1-202ENST00000641796 1061 ntBASIC4.87□□□□□ -1.63
CIITAP33076 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.87□□□□□ -1.63
CIITAP33076 AC104446.1-201ENST00000613728 1321 ntBASIC4.87□□□□□ -1.63
CIITAP33076 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.87□□□□□ -1.63
CIITAP33076 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CIITAP33076 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.86□□□□□ -1.63
CIITAP33076 RNU6-549P-201ENST00000384433 107 ntBASIC4.86□□□□□ -1.63
CIITAP33076 AL161909.1-201ENST00000397390 712 ntBASIC4.86□□□□□ -1.63
CIITAP33076 RAB28P1-201ENST00000411517 641 ntBASIC4.86□□□□□ -1.63
CIITAP33076 AC073136.2-201ENST00000417282 849 ntBASIC4.86□□□□□ -1.63
CIITAP33076 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.86□□□□□ -1.63
CIITAP33076 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.86□□□□□ -1.63
CIITAP33076 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.86□□□□□ -1.63
CIITAP33076 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.86□□□□□ -1.63
CIITAP33076 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.86□□□□□ -1.63
CIITAP33076 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.86□□□□□ -1.63
CIITAP33076 AC092170.1-201ENST00000440211 356 ntBASIC4.86□□□□□ -1.63
CIITAP33076 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.86□□□□□ -1.63
CIITAP33076 AL592437.1-201ENST00000443781 492 ntBASIC4.86□□□□□ -1.63
CIITAP33076 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.86□□□□□ -1.63
CIITAP33076 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.86□□□□□ -1.63
CIITAP33076 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.86□□□□□ -1.63
CIITAP33076 AC006511.1-201ENST00000470614 315 ntBASIC4.86□□□□□ -1.63
CIITAP33076 UQCRHP4-201ENST00000471686 272 ntBASIC4.86□□□□□ -1.63
CIITAP33076 MTND2P14-201ENST00000482139 351 ntBASIC4.86□□□□□ -1.63
CIITAP33076 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.86□□□□□ -1.63
CIITAP33076 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CIITAP33076 AC010486.3-201ENST00000511602 785 ntBASIC4.86□□□□□ -1.63
CIITAP33076 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.86□□□□□ -1.63
CIITAP33076 CYCSP29-201ENST00000533731 318 ntBASIC4.86□□□□□ -1.63
CIITAP33076 AC135279.1-201ENST00000543493 504 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms