Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.02□□□□□ -1.77
CASQ1P31415 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.02□□□□□ -1.77
CASQ1P31415 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.02□□□□□ -1.77
CASQ1P31415 USP9YP9-201ENST00000429406 715 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.02□□□□□ -1.77
CASQ1P31415 NDUFB1P1-201ENST00000435191 180 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 AL627308.1-201ENST00000435693 821 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 AL513533.1-201ENST00000453728 415 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.02□□□□□ -1.77
CASQ1P31415 AP002884.2-201ENST00000471647 395 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.02□□□□□ -1.77
CASQ1P31415 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.02□□□□□ -1.77
CASQ1P31415 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.02□□□□□ -1.77
CASQ1P31415 AC108475.1-201ENST00000507880 950 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 AC111000.3-201ENST00000508057 576 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.02□□□□□ -1.77
CASQ1P31415 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.02□□□□□ -1.77
CASQ1P31415 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.02□□□□□ -1.77
CASQ1P31415 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.02□□□□□ -1.77
CASQ1P31415 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.02□□□□□ -1.77
CASQ1P31415 YPEL5P3-201ENST00000547227 352 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 PSMB7P1-201ENST00000556349 514 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 TGIF1P1-201ENST00000558095 802 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.02□□□□□ -1.77
CASQ1P31415 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.02□□□□□ -1.77
CASQ1P31415 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.02□□□□□ -1.77
CASQ1P31415 MIR4474-201ENST00000579189 78 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 AC091953.3-201ENST00000623220 236 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CASQ1P31415 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.02□□□□□ -1.77
CASQ1P31415 AC116096.1-201ENST00000566804 2314 ntBASIC4.02□□□□□ -1.77
CASQ1P31415 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.02□□□□□ -1.77
CASQ1P31415 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.02□□□□□ -1.77
CASQ1P31415 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CASQ1P31415 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
CASQ1P31415 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.01□□□□□ -1.77
CASQ1P31415 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CASQ1P31415 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CASQ1P31415 RPS3AP23-201ENST00000401762 784 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 OR51AB1P-201ENST00000429046 620 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CASQ1P31415 AL513343.1-201ENST00000451818 792 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 AC006463.2-201ENST00000473326 348 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 ACTG1P13-201ENST00000486987 1043 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 FCF1P3-201ENST00000496394 590 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 AC021146.5-201ENST00000503544 545 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CASQ1P31415 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CASQ1P31415 MTCYBP41-201ENST00000528913 1123 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.01□□□□□ -1.77
CASQ1P31415 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.01□□□□□ -1.77
CASQ1P31415 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.01□□□□□ -1.77
CASQ1P31415 AL049870.4-201ENST00000555741 486 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 AC092868.3-201ENST00000560515 784 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 AC115989.2-201ENST00000578640 563 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.01□□□□□ -1.77
CASQ1P31415 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.01□□□□□ -1.77
CASQ1P31415 AC005191.1-201ENST00000603950 358 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 AC009948.4-201ENST00000604692 675 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 AC079684.1-201ENST00000621405 437 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 AC010608.2-201ENST00000624830 470 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.01□□□□□ -1.77
CASQ1P31415 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CASQ1P31415 AL021368.2-201ENST00000606125 5352 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.01□□□□□ -1.77
CASQ1P31415 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CASQ1P31415 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.01□□□□□ -1.77
CASQ1P31415 LARP1BP1-201ENST00000506036 1359 ntBASIC4.01□□□□□ -1.77
CASQ1P31415 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4□□□□□ -1.77
CASQ1P31415 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CASQ1P31415 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4□□□□□ -1.77
CASQ1P31415 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CASQ1P31415 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CASQ1P31415 AC079741.1-201ENST00000321498 212 ntBASIC4□□□□□ -1.77
CASQ1P31415 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CASQ1P31415 RNA5SP235-201ENST00000365411 114 ntBASIC4□□□□□ -1.77
CASQ1P31415 RNA5SP366-201ENST00000365454 123 ntBASIC4□□□□□ -1.77
CASQ1P31415 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4□□□□□ -1.77
CASQ1P31415 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
CASQ1P31415 RNU4-31P-201ENST00000384211 141 ntBASIC4□□□□□ -1.77
CASQ1P31415 RNU6-452P-201ENST00000384406 107 ntBASIC4□□□□□ -1.77
CASQ1P31415 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4□□□□□ -1.77
CASQ1P31415 AC108032.1-201ENST00000416706 207 ntBASIC4□□□□□ -1.77
CASQ1P31415 TBCAP1-201ENST00000436520 327 ntBASIC4□□□□□ -1.77
CASQ1P31415 RPL12P11-201ENST00000439970 501 ntBASIC4□□□□□ -1.77
CASQ1P31415 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4□□□□□ -1.77
CASQ1P31415 AL627224.1-201ENST00000448334 444 ntBASIC4□□□□□ -1.77
CASQ1P31415 TPT1P13-201ENST00000449760 499 ntBASIC4□□□□□ -1.77
CASQ1P31415 AC006480.1-201ENST00000449887 378 ntBASIC4□□□□□ -1.77
CASQ1P31415 ARPC3P2-201ENST00000457786 533 ntBASIC4□□□□□ -1.77
CASQ1P31415 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4□□□□□ -1.77
CASQ1P31415 RPL5P24-201ENST00000463742 885 ntBASIC4□□□□□ -1.77
CASQ1P31415 AC021087.2-201ENST00000504656 1203 ntBASIC4□□□□□ -1.77
CASQ1P31415 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4□□□□□ -1.77
CASQ1P31415 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4□□□□□ -1.77
CASQ1P31415 RN7SKP289-201ENST00000517244 295 ntBASIC4□□□□□ -1.77
CASQ1P31415 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4□□□□□ -1.77
CASQ1P31415 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4□□□□□ -1.77
CASQ1P31415 IGKV2D-19-201ENST00000523346 262 ntBASIC4□□□□□ -1.77
CASQ1P31415 OR4R3P-201ENST00000525084 838 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms