Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXC12P31275 RPL23AP32-201ENST00000395315 459 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AL356421.1-201ENST00000403255 413 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AL391361.1-201ENST00000405580 489 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 RNU2-41P-201ENST00000410991 178 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AL359704.1-201ENST00000411586 781 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AC078974.1-201ENST00000411597 223 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC12P31275 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC12P31275 HMGB3P20-201ENST00000417997 600 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AC245054.1-201ENST00000420944 258 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AL353777.1-201ENST00000425552 326 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC12P31275 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC12P31275 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC12P31275 AL445665.1-202ENST00000452436 324 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 HMGB1P15-201ENST00000453854 435 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 APOOP2-201ENST00000461561 539 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AC093267.1-201ENST00000489176 961 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AC091951.2-201ENST00000500762 203 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC12P31275 snoU109.5-201ENST00000516231 132 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 SCARNA18.1-201ENST00000516330 83 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AP003034.1-201ENST00000534621 422 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC12P31275 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC12P31275 AC092121.1-201ENST00000569452 202 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AP005119.2-201ENST00000579735 1105 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AC090616.5-202ENST00000582111 297 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AL353997.4-201ENST00000586196 166 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HOXC12P31275 AC121334.2-201ENST00000605387 271 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXC12P31275 RN7SL787P-201ENST00000613000 284 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 MIR6719-201ENST00000622428 87 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AC004009.2-201ENST00000623016 728 ntBASIC5.32□□□□□ -1.56
HOXC12P31275 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXC12P31275 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXC12P31275 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HOXC12P31275 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXC12P31275 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HOXC12P31275 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
HOXC12P31275 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXC12P31275 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXC12P31275 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 RBMY1HP-201ENST00000382759 1389 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AC138915.3-201ENST00000562908 1389 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 GNL2P1-201ENST00000451274 2190 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXC12P31275 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 Y_RNA.160-201ENST00000363677 92 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 RNU105B-201ENST00000364478 208 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 RNU6-761P-201ENST00000384148 107 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 SNORA70.9-201ENST00000384370 135 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 MIR105-2-201ENST00000385083 81 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HOXC12P31275 RNU6-603P-201ENST00000411403 107 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AL096829.1-201ENST00000413677 457 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 JKAMPP1-201ENST00000413804 919 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 OR51A5P-201ENST00000415429 942 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 RPL36AP36-201ENST00000418616 301 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 RPL31P45-201ENST00000419532 356 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 RPS15AP30-201ENST00000420976 390 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.31□□□□□ -1.56
HOXC12P31275 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXC12P31275 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 AC245884.2-201ENST00000426257 404 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC12P31275 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC12P31275 AC105402.2-201ENST00000438503 358 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 HMGB3P12-201ENST00000438745 556 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AC064862.4-201ENST00000442180 334 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXC12P31275 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXC12P31275 RPL36AP39-201ENST00000445859 318 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXC12P31275 RPL23AP20-201ENST00000447965 421 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AC005077.1-201ENST00000449226 375 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 GAPDHP14-201ENST00000450472 937 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AP006222.1-205ENST00000450734 457 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 AC104073.1-201ENST00000451988 151 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 snoU13.7-201ENST00000459220 104 ntBASIC5.31□□□□□ -1.56
HOXC12P31275 UBFD1P1-201ENST00000473259 814 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms