Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 HMGN1P24-201ENST00000412282 298 ntBASIC5.3□□□□□ -1.56
CLIP1P30622 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP1P30622 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.3□□□□□ -1.56
CLIP1P30622 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.3□□□□□ -1.56
CLIP1P30622 AP001992.1-205ENST00000462248 379 ntBASIC5.3□□□□□ -1.56
CLIP1P30622 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP1P30622 AC006445.1-201ENST00000491925 405 ntBASIC5.3□□□□□ -1.56
CLIP1P30622 SNORA70.19-201ENST00000516717 90 ntBASIC5.3□□□□□ -1.56
CLIP1P30622 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP1P30622 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP1P30622 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.3□□□□□ -1.56
CLIP1P30622 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.3□□□□□ -1.56
CLIP1P30622 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CLIP1P30622 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CLIP1P30622 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.29□□□□□ -1.56
CLIP1P30622 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CLIP1P30622 UBA52P6-201ENST00000399822 382 ntBASIC5.29□□□□□ -1.56
CLIP1P30622 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.29□□□□□ -1.56
CLIP1P30622 LIPT1P1-201ENST00000415870 1186 ntBASIC5.29□□□□□ -1.56
CLIP1P30622 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.29□□□□□ -1.56
CLIP1P30622 AL353705.1-201ENST00000433468 480 ntBASIC5.29□□□□□ -1.56
CLIP1P30622 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP1P30622 AL133477.1-201ENST00000457472 514 ntBASIC5.29□□□□□ -1.56
CLIP1P30622 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP1P30622 PTGES3P3-201ENST00000511479 482 ntBASIC5.29□□□□□ -1.56
CLIP1P30622 AC023141.12-201ENST00000512399 199 ntBASIC5.29□□□□□ -1.56
CLIP1P30622 APOOP4-201ENST00000513530 597 ntBASIC5.29□□□□□ -1.56
CLIP1P30622 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.29□□□□□ -1.56
CLIP1P30622 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CLIP1P30622 NEAT1-202ENST00000501122 22743 ntBASIC5.29□□□□□ -1.56
CLIP1P30622 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLIP1P30622 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLIP1P30622 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CLIP1P30622 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CLIP1P30622 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.28□□□□□ -1.56
CLIP1P30622 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLIP1P30622 GSTA8P-201ENST00000404253 637 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 RNA5SP296-201ENST00000410523 111 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 AC126124.2-201ENST00000413542 321 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 BOLA3P4-201ENST00000418151 400 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 RPL7P44-201ENST00000424827 742 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 MTCO1P45-201ENST00000431457 267 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC5.28□□□□□ -1.56
CLIP1P30622 RPL27AP5-201ENST00000469428 449 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 AC109925.1-201ENST00000478069 331 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 RPS3AP14-201ENST00000483907 780 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 RPL7P23-201ENST00000493874 747 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.28□□□□□ -1.56
CLIP1P30622 AC107934.2-201ENST00000518653 310 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.28□□□□□ -1.56
CLIP1P30622 AC141257.3-201ENST00000572906 215 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 AC026422.1-201ENST00000623961 452 ntBASIC5.28□□□□□ -1.56
CLIP1P30622 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP1P30622 HIST1H2APS3-201ENST00000403259 134 ntBASIC5.27□□□□□ -1.57
CLIP1P30622 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.27□□□□□ -1.57
CLIP1P30622 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP1P30622 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP1P30622 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.27□□□□□ -1.57
CLIP1P30622 RPS6P4-201ENST00000494693 758 ntBASIC5.27□□□□□ -1.57
CLIP1P30622 IGHV3-32-201ENST00000519182 355 ntBASIC5.27□□□□□ -1.57
CLIP1P30622 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP1P30622 EIF4BP1-201ENST00000554881 351 ntBASIC5.27□□□□□ -1.57
CLIP1P30622 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP1P30622 AL158196.1-201ENST00000616786 434 ntBASIC5.27□□□□□ -1.57
CLIP1P30622 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLIP1P30622 RMST_9.1-201ENST00000619945 193 ntBASIC5.27□□□□□ -1.57
CLIP1P30622 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.27□□□□□ -1.57
CLIP1P30622 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP1P30622 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP1P30622 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLIP1P30622 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLIP1P30622 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP1P30622 U3.26-201ENST00000391236 204 ntBASIC5.26□□□□□ -1.57
CLIP1P30622 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP1P30622 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP1P30622 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP1P30622 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.26□□□□□ -1.57
CLIP1P30622 RN7SKP289-201ENST00000517244 295 ntBASIC5.26□□□□□ -1.57
CLIP1P30622 AC004024.1-201ENST00000549244 247 ntBASIC5.26□□□□□ -1.57
CLIP1P30622 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.26□□□□□ -1.57
CLIP1P30622 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP1P30622 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.26□□□□□ -1.57
CLIP1P30622 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CLIP1P30622 AF117829.1-206ENST00000621883 3802 ntBASIC5.26□□□□□ -1.57
CLIP1P30622 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CLIP1P30622 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLIP1P30622 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP1P30622 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP1P30622 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLIP1P30622 MRPS31P2-201ENST00000451581 518 ntBASIC5.25□□□□□ -1.57
CLIP1P30622 AC090136.1-201ENST00000520009 240 ntBASIC5.25□□□□□ -1.57
CLIP1P30622 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.25□□□□□ -1.57
CLIP1P30622 AC018442.3-201ENST00000523025 183 ntBASIC5.25□□□□□ -1.57
CLIP1P30622 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP1P30622 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.25□□□□□ -1.57
CLIP1P30622 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.25□□□□□ -1.57
CLIP1P30622 AC005858.4-201ENST00000623191 700 ntBASIC5.25□□□□□ -1.57
CLIP1P30622 SCARNA15.3-201ENST00000626315 122 ntBASIC5.25□□□□□ -1.57
CLIP1P30622 SCARNA4.1-201ENST00000628597 123 ntBASIC5.25□□□□□ -1.57
CLIP1P30622 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms