Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC1P29353 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHC1P29353 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.8□□□□□ -1.8
SHC1P29353 MRPS36P3-201ENST00000519284 130 ntBASIC3.8□□□□□ -1.8
SHC1P29353 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC1P29353 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC1P29353 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.8□□□□□ -1.8
SHC1P29353 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.8□□□□□ -1.8
SHC1P29353 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.8□□□□□ -1.8
SHC1P29353 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC1P29353 MIR4789-201ENST00000577469 82 ntBASIC3.8□□□□□ -1.8
SHC1P29353 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC1P29353 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.8□□□□□ -1.8
SHC1P29353 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHC1P29353 DUXAP3-201ENST00000603616 594 ntBASIC3.8□□□□□ -1.8
SHC1P29353 AC090948.2-201ENST00000607363 564 ntBASIC3.8□□□□□ -1.8
SHC1P29353 AC092954.1-201ENST00000609121 445 ntBASIC3.8□□□□□ -1.8
SHC1P29353 AL023881.1-201ENST00000621088 301 ntBASIC3.8□□□□□ -1.8
SHC1P29353 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.8□□□□□ -1.8
SHC1P29353 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SHC1P29353 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SHC1P29353 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHC1P29353 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHC1P29353 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHC1P29353 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHC1P29353 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHC1P29353 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHC1P29353 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHC1P29353 AC005261.4-201ENST00000600047 1385 ntBASIC3.79□□□□□ -1.8
SHC1P29353 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SHC1P29353 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHC1P29353 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHC1P29353 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHC1P29353 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHC1P29353 AL356489.2-201ENST00000566968 3528 ntBASIC3.79□□□□□ -1.8
SHC1P29353 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHC1P29353 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SHC1P29353 RNU4-28P-201ENST00000364739 141 ntBASIC3.79□□□□□ -1.8
SHC1P29353 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SHC1P29353 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
SHC1P29353 RNU6-532P-201ENST00000384318 107 ntBASIC3.79□□□□□ -1.8
SHC1P29353 AL049693.1-201ENST00000402760 611 ntBASIC3.79□□□□□ -1.8
SHC1P29353 RPS27AP11-201ENST00000402798 447 ntBASIC3.79□□□□□ -1.8
SHC1P29353 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.79□□□□□ -1.8
SHC1P29353 RNU4-22P-201ENST00000411058 166 ntBASIC3.79□□□□□ -1.8
SHC1P29353 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.79□□□□□ -1.8
SHC1P29353 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.79□□□□□ -1.8
SHC1P29353 RPL22P18-201ENST00000417197 377 ntBASIC3.79□□□□□ -1.8
SHC1P29353 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.79□□□□□ -1.8
SHC1P29353 RPL23AP38-201ENST00000423801 469 ntBASIC3.79□□□□□ -1.8
SHC1P29353 BTF3P10-201ENST00000433415 495 ntBASIC3.79□□□□□ -1.8
SHC1P29353 RPS20P1-201ENST00000434853 354 ntBASIC3.79□□□□□ -1.8
SHC1P29353 RPL12P46-201ENST00000436610 195 ntBASIC3.79□□□□□ -1.8
SHC1P29353 RPL23AP89-201ENST00000439324 255 ntBASIC3.79□□□□□ -1.8
SHC1P29353 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.79□□□□□ -1.8
SHC1P29353 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.79□□□□□ -1.8
SHC1P29353 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.79□□□□□ -1.8
SHC1P29353 VN1R40P-201ENST00000455196 941 ntBASIC3.79□□□□□ -1.8
SHC1P29353 UBA52P3-201ENST00000491303 382 ntBASIC3.79□□□□□ -1.8
SHC1P29353 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.79□□□□□ -1.8
SHC1P29353 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.79□□□□□ -1.8
SHC1P29353 KCTD9P2-201ENST00000512203 1013 ntBASIC3.79□□□□□ -1.8
SHC1P29353 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.79□□□□□ -1.8
SHC1P29353 AP003730.1-201ENST00000524605 285 ntBASIC3.79□□□□□ -1.8
SHC1P29353 AC105233.3-201ENST00000531125 744 ntBASIC3.79□□□□□ -1.8
SHC1P29353 AP003717.3-201ENST00000544832 1180 ntBASIC3.79□□□□□ -1.8
SHC1P29353 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.79□□□□□ -1.8
SHC1P29353 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.79□□□□□ -1.8
SHC1P29353 AC091515.1-201ENST00000548110 679 ntBASIC3.79□□□□□ -1.8
SHC1P29353 AC022655.2-201ENST00000577280 318 ntBASIC3.79□□□□□ -1.8
SHC1P29353 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.79□□□□□ -1.8
SHC1P29353 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.79□□□□□ -1.8
SHC1P29353 PCNAP1-202ENST00000595299 752 ntBASIC3.79□□□□□ -1.8
SHC1P29353 AL590392.1-201ENST00000604960 446 ntBASIC3.79□□□□□ -1.8
SHC1P29353 AC064801.1-201ENST00000612025 407 ntBASIC3.79□□□□□ -1.8
SHC1P29353 PART1_2.1-201ENST00000612397 250 ntBASIC3.79□□□□□ -1.8
SHC1P29353 AC231759.1-201ENST00000616455 597 ntBASIC3.79□□□□□ -1.8
SHC1P29353 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.79□□□□□ -1.8
SHC1P29353 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHC1P29353 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SHC1P29353 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.79□□□□□ -1.8
SHC1P29353 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SHC1P29353 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHC1P29353 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHC1P29353 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHC1P29353 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.79□□□□□ -1.8
SHC1P29353 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHC1P29353 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.78□□□□□ -1.8
SHC1P29353 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHC1P29353 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.78□□□□□ -1.8
SHC1P29353 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.78□□□□□ -1.8
SHC1P29353 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHC1P29353 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SHC1P29353 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SHC1P29353 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SHC1P29353 AL031985.3-201ENST00000565390 2449 ntBASIC3.78□□□□□ -1.8
SHC1P29353 U6.112-201ENST00000384129 70 ntBASIC3.78□□□□□ -1.8
SHC1P29353 SNORA37-201ENST00000384504 129 ntBASIC3.78□□□□□ -1.8
SHC1P29353 MCTS2P-201ENST00000394552 546 ntBASIC3.78□□□□□ -1.8
SHC1P29353 RNU4-74P-201ENST00000411280 161 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms