Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.62□□□□□ -1.35
VARSP26640 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.62□□□□□ -1.35
VARSP26640 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.62□□□□□ -1.35
VARSP26640 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.62□□□□□ -1.35
VARSP26640 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.62□□□□□ -1.35
VARSP26640 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.62□□□□□ -1.35
VARSP26640 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.62□□□□□ -1.35
VARSP26640 CTSLP2-201ENST00000580501 394 ntBASIC6.62□□□□□ -1.35
VARSP26640 MIR6780B-201ENST00000610307 79 ntBASIC6.62□□□□□ -1.35
VARSP26640 MIR7109-201ENST00000613748 65 ntBASIC6.62□□□□□ -1.35
VARSP26640 AL355365.1-201ENST00000616480 294 ntBASIC6.62□□□□□ -1.35
VARSP26640 AC015967.1-201ENST00000619893 476 ntBASIC6.62□□□□□ -1.35
VARSP26640 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.62□□□□□ -1.35
VARSP26640 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.62□□□□□ -1.35
VARSP26640 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
VARSP26640 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.62□□□□□ -1.35
VARSP26640 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
VARSP26640 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.62□□□□□ -1.35
VARSP26640 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
VARSP26640 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.61□□□□□ -1.35
VARSP26640 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.61□□□□□ -1.35
VARSP26640 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.61□□□□□ -1.35
VARSP26640 DLEU2L-201ENST00000371086 3555 ntBASIC6.61□□□□□ -1.35
VARSP26640 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.61□□□□□ -1.35
VARSP26640 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
VARSP26640 RNU6-28P-201ENST00000362378 107 ntBASIC6.61□□□□□ -1.35
VARSP26640 RNU6-490P-201ENST00000362985 107 ntBASIC6.61□□□□□ -1.35
VARSP26640 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.61□□□□□ -1.35
VARSP26640 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VARSP26640 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 MIR99A-201ENST00000384906 81 ntBASIC6.61□□□□□ -1.35
VARSP26640 RNU6-823P-201ENST00000391042 103 ntBASIC6.61□□□□□ -1.35
VARSP26640 SNORA75.6-201ENST00000391318 127 ntBASIC6.61□□□□□ -1.35
VARSP26640 AC016769.3-201ENST00000396562 315 ntBASIC6.61□□□□□ -1.35
VARSP26640 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.61□□□□□ -1.35
VARSP26640 AL713922.1-201ENST00000416477 747 ntBASIC6.61□□□□□ -1.35
VARSP26640 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.61□□□□□ -1.35
VARSP26640 MED13P1-201ENST00000428342 171 ntBASIC6.61□□□□□ -1.35
VARSP26640 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.61□□□□□ -1.35
VARSP26640 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.61□□□□□ -1.35
VARSP26640 AL359265.2-201ENST00000434367 631 ntBASIC6.61□□□□□ -1.35
VARSP26640 OSTCP8-201ENST00000445117 448 ntBASIC6.61□□□□□ -1.35
VARSP26640 AL392103.1-201ENST00000447000 198 ntBASIC6.61□□□□□ -1.35
VARSP26640 OR1H1P-201ENST00000448731 937 ntBASIC6.61□□□□□ -1.35
VARSP26640 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.61□□□□□ -1.35
VARSP26640 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.61□□□□□ -1.35
VARSP26640 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.61□□□□□ -1.35
VARSP26640 RNU6-470P-201ENST00000515954 104 ntBASIC6.61□□□□□ -1.35
VARSP26640 SNORD116.3-201ENST00000517176 78 ntBASIC6.61□□□□□ -1.35
VARSP26640 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.61□□□□□ -1.35
VARSP26640 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.61□□□□□ -1.35
VARSP26640 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.61□□□□□ -1.35
VARSP26640 MIR3128-201ENST00000581957 66 ntBASIC6.61□□□□□ -1.35
VARSP26640 MIR4271-201ENST00000582451 67 ntBASIC6.61□□□□□ -1.35
VARSP26640 MIR4310-201ENST00000582950 57 ntBASIC6.61□□□□□ -1.35
VARSP26640 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
VARSP26640 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.61□□□□□ -1.35
VARSP26640 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.61□□□□□ -1.35
VARSP26640 AC078899.3-201ENST00000599065 212 ntBASIC6.61□□□□□ -1.35
VARSP26640 AC091768.1-201ENST00000609258 930 ntBASIC6.61□□□□□ -1.35
VARSP26640 MIR6128-201ENST00000615528 109 ntBASIC6.61□□□□□ -1.35
VARSP26640 AC244100.1-202ENST00000621554 382 ntBASIC6.61□□□□□ -1.35
VARSP26640 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
VARSP26640 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
VARSP26640 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.61□□□□□ -1.35
VARSP26640 AC093278.2-201ENST00000564956 2485 ntBASIC6.61□□□□□ -1.35
VARSP26640 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.61□□□□□ -1.35
VARSP26640 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 AC083837.1-201ENST00000565297 2994 ntBASIC6.61□□□□□ -1.35
VARSP26640 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.61□□□□□ -1.35
VARSP26640 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.61□□□□□ -1.35
VARSP26640 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 CASC19-204ENST00000641001 2055 ntBASIC6.61□□□□□ -1.35
VARSP26640 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VARSP26640 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.6□□□□□ -1.35
VARSP26640 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.6□□□□□ -1.35
VARSP26640 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.6□□□□□ -1.35
VARSP26640 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 Y_RNA.152-201ENST00000363578 100 ntBASIC6.6□□□□□ -1.35
VARSP26640 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VARSP26640 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms