Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC006270.2-201ENST00000578523 652 ntBASIC3.21□□□□□ -1.9
ATF1P18846 AC007448.1-201ENST00000582714 234 ntBASIC3.21□□□□□ -1.9
ATF1P18846 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.21□□□□□ -1.9
ATF1P18846 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.21□□□□□ -1.9
ATF1P18846 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.21□□□□□ -1.9
ATF1P18846 MIR6830-201ENST00000636015 70 ntBASIC3.21□□□□□ -1.9
ATF1P18846 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.21□□□□□ -1.9
ATF1P18846 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATF1P18846 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
ATF1P18846 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.21□□□□□ -1.9
ATF1P18846 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ATF1P18846 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.21□□□□□ -1.9
ATF1P18846 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
ATF1P18846 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.21□□□□□ -1.9
ATF1P18846 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATF1P18846 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATF1P18846 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.2□□□□□ -1.9
ATF1P18846 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATF1P18846 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATF1P18846 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATF1P18846 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATF1P18846 RNA5SP391-201ENST00000363456 119 ntBASIC3.2□□□□□ -1.9
ATF1P18846 RNU6-213P-201ENST00000384051 104 ntBASIC3.2□□□□□ -1.9
ATF1P18846 MIR153-1-201ENST00000384914 90 ntBASIC3.2□□□□□ -1.9
ATF1P18846 SOD2P1-201ENST00000396543 562 ntBASIC3.2□□□□□ -1.9
ATF1P18846 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.2□□□□□ -1.9
ATF1P18846 RNA5SP317-201ENST00000410176 116 ntBASIC3.2□□□□□ -1.9
ATF1P18846 RNU6-55P-201ENST00000411092 107 ntBASIC3.2□□□□□ -1.9
ATF1P18846 RNA5SP311-201ENST00000411290 116 ntBASIC3.2□□□□□ -1.9
ATF1P18846 RNU6-954P-201ENST00000411355 107 ntBASIC3.2□□□□□ -1.9
ATF1P18846 RPL31P45-201ENST00000419532 356 ntBASIC3.2□□□□□ -1.9
ATF1P18846 OR8F1P-201ENST00000425243 930 ntBASIC3.2□□□□□ -1.9
ATF1P18846 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.2□□□□□ -1.9
ATF1P18846 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.2□□□□□ -1.9
ATF1P18846 SETD6P1-201ENST00000444575 317 ntBASIC3.2□□□□□ -1.9
ATF1P18846 ARL5AP2-201ENST00000444698 533 ntBASIC3.2□□□□□ -1.9
ATF1P18846 AC006326.1-201ENST00000445465 787 ntBASIC3.2□□□□□ -1.9
ATF1P18846 AC114755.5-201ENST00000447760 831 ntBASIC3.2□□□□□ -1.9
ATF1P18846 OR9M1P-201ENST00000459641 921 ntBASIC3.2□□□□□ -1.9
ATF1P18846 RPL9P32-201ENST00000464118 620 ntBASIC3.2□□□□□ -1.9
ATF1P18846 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.2□□□□□ -1.9
ATF1P18846 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ATF1P18846 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.2□□□□□ -1.9
ATF1P18846 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.2□□□□□ -1.9
ATF1P18846 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.2□□□□□ -1.9
ATF1P18846 RNA5SP315-201ENST00000516340 116 ntBASIC3.2□□□□□ -1.9
ATF1P18846 RN7SKP82-201ENST00000516786 223 ntBASIC3.2□□□□□ -1.9
ATF1P18846 RNA5SP312-201ENST00000517068 116 ntBASIC3.2□□□□□ -1.9
ATF1P18846 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.2□□□□□ -1.9
ATF1P18846 AP006245.1-201ENST00000522549 120 ntBASIC3.2□□□□□ -1.9
ATF1P18846 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.2□□□□□ -1.9
ATF1P18846 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.2□□□□□ -1.9
ATF1P18846 AC008011.1-201ENST00000545989 227 ntBASIC3.2□□□□□ -1.9
ATF1P18846 TRAV15-201ENST00000556680 249 ntBASIC3.2□□□□□ -1.9
ATF1P18846 MIR5047-201ENST00000579212 100 ntBASIC3.2□□□□□ -1.9
ATF1P18846 PCNAP1-202ENST00000595299 752 ntBASIC3.2□□□□□ -1.9
ATF1P18846 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
ATF1P18846 AL606490.9-201ENST00000603331 271 ntBASIC3.2□□□□□ -1.9
ATF1P18846 AL023583.1-201ENST00000607518 1143 ntBASIC3.2□□□□□ -1.9
ATF1P18846 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.2□□□□□ -1.9
ATF1P18846 AL391597.1-201ENST00000618707 694 ntBASIC3.2□□□□□ -1.9
ATF1P18846 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.2□□□□□ -1.9
ATF1P18846 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.2□□□□□ -1.9
ATF1P18846 AC138649.5-201ENST00000637456 137 ntBASIC3.2□□□□□ -1.9
ATF1P18846 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ATF1P18846 AL732372.2-225ENST00000642124 456 ntBASIC3.2□□□□□ -1.9
ATF1P18846 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
ATF1P18846 NMD3P1-201ENST00000439704 1488 ntBASIC3.2□□□□□ -1.9
ATF1P18846 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATF1P18846 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ATF1P18846 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ATF1P18846 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATF1P18846 MIR30E-201ENST00000362104 92 ntBASIC3.19□□□□□ -1.9
ATF1P18846 SNORD6-201ENST00000365444 73 ntBASIC3.19□□□□□ -1.9
ATF1P18846 RNU6-152P-201ENST00000384037 107 ntBASIC3.19□□□□□ -1.9
ATF1P18846 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
ATF1P18846 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATF1P18846 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.19□□□□□ -1.9
ATF1P18846 LIPT1P1-201ENST00000415870 1186 ntBASIC3.19□□□□□ -1.9
ATF1P18846 RPL31P12-201ENST00000422587 358 ntBASIC3.19□□□□□ -1.9
ATF1P18846 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.19□□□□□ -1.9
ATF1P18846 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.19□□□□□ -1.9
ATF1P18846 AL606490.7-201ENST00000433136 191 ntBASIC3.19□□□□□ -1.9
ATF1P18846 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.19□□□□□ -1.9
ATF1P18846 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ATF1P18846 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.19□□□□□ -1.9
ATF1P18846 HMGB3P8-201ENST00000449709 577 ntBASIC3.19□□□□□ -1.9
ATF1P18846 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.19□□□□□ -1.9
ATF1P18846 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.19□□□□□ -1.9
ATF1P18846 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.19□□□□□ -1.9
ATF1P18846 RPS20P32-201ENST00000456044 356 ntBASIC3.19□□□□□ -1.9
ATF1P18846 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.19□□□□□ -1.9
ATF1P18846 AC010401.1-201ENST00000463867 348 ntBASIC3.19□□□□□ -1.9
ATF1P18846 AC107398.1-201ENST00000486904 505 ntBASIC3.19□□□□□ -1.9
ATF1P18846 RPL7P47-201ENST00000497299 556 ntBASIC3.19□□□□□ -1.9
ATF1P18846 SNX5P1-201ENST00000505757 1041 ntBASIC3.19□□□□□ -1.9
ATF1P18846 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.19□□□□□ -1.9
ATF1P18846 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.19□□□□□ -1.9
ATF1P18846 RN7SKP122-201ENST00000515923 296 ntBASIC3.19□□□□□ -1.9
ATF1P18846 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms