Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN1P18031 VDAC1P6-201ENST00000430062 855 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN1P18031 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN1P18031 VN1R54P-201ENST00000435210 1049 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 PSMD10P3-201ENST00000437000 448 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 AC122718.1-201ENST00000439448 744 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN1P18031 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.44□□□□□ -1.54
PTPN1P18031 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN1P18031 AC098824.1-201ENST00000453565 980 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN1P18031 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN1P18031 RN7SL443P-201ENST00000464331 290 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 FAM133DP-201ENST00000464802 691 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 MTND6P6-201ENST00000478031 263 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 OR4G11P-201ENST00000492842 939 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN1P18031 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN1P18031 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN1P18031 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN1P18031 AP002748.2-201ENST00000528671 348 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 AC027369.5-201ENST00000533838 755 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN1P18031 OR6C73P-201ENST00000546432 358 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN1P18031 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.44□□□□□ -1.54
PTPN1P18031 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN1P18031 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN1P18031 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN1P18031 AC011451.2-201ENST00000604303 598 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 AC093799.2-201ENST00000610062 578 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 Z95327.3-201ENST00000610385 572 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 AC090510.2-201ENST00000617465 629 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN1P18031 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.44□□□□□ -1.54
PTPN1P18031 SCARNA15-201ENST00000607520 4325 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PTPN1P18031 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
PTPN1P18031 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
PTPN1P18031 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN1P18031 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN1P18031 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN1P18031 AC090017.1-201ENST00000548612 1779 ntBASIC5.44□□□□□ -1.54
PTPN1P18031 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN1P18031 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PTPN1P18031 ELF2P3-201ENST00000445099 1506 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN1P18031 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN1P18031 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 CASC19-204ENST00000641001 2055 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN1P18031 RBPJP2-201ENST00000618187 1444 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN1P18031 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.43□□□□□ -1.54
PTPN1P18031 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 RNA5SP455-201ENST00000365190 119 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PTPN1P18031 SNORA40.3-201ENST00000390964 122 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 RPL17P50-201ENST00000396131 546 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 GJA6P-201ENST00000415117 1042 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN1P18031 MTND4P25-201ENST00000441039 533 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 AL022238.1-201ENST00000442557 355 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 AC244505.5-201ENST00000443639 207 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN1P18031 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN1P18031 AC013828.1-201ENST00000481845 158 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 RPL9P6-201ENST00000492764 598 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 AC105252.1-201ENST00000503089 286 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN1P18031 AC098976.1-201ENST00000513014 541 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.43□□□□□ -1.54
PTPN1P18031 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.43□□□□□ -1.54
PTPN1P18031 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN1P18031 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN1P18031 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN1P18031 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 AC122134.1-201ENST00000565664 1104 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.43□□□□□ -1.54
PTPN1P18031 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN1P18031 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN1P18031 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN1P18031 AC098614.4-201ENST00000607601 462 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 AL159169.3-201ENST00000608871 561 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 AC091834.1-201ENST00000614543 472 ntBASIC5.43□□□□□ -1.54
PTPN1P18031 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.43□□□□□ -1.54
PTPN1P18031 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
PTPN1P18031 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN1P18031 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN1P18031 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms