Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
COL3A1P02461 Z97055.1-201ENST00000419730 712 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.25□□□□□ -1.57
COL3A1P02461 RPL12P18-201ENST00000437175 325 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.25□□□□□ -1.57
COL3A1P02461 RNU6-599P-201ENST00000459383 107 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 RNU6-1193P-201ENST00000459461 107 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 RPS3AP43-201ENST00000479743 781 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.25□□□□□ -1.57
COL3A1P02461 GOLGA5P1-201ENST00000507317 980 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.25□□□□□ -1.57
COL3A1P02461 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.25□□□□□ -1.57
COL3A1P02461 AP000926.4-201ENST00000527351 454 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.25□□□□□ -1.57
COL3A1P02461 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
COL3A1P02461 MTND4P33-201ENST00000556706 766 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.25□□□□□ -1.57
COL3A1P02461 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.25□□□□□ -1.57
COL3A1P02461 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
COL3A1P02461 AC004987.4-201ENST00000603383 338 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 AC087468.1-201ENST00000604365 630 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 VIS1.1-201ENST00000610517 203 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.25□□□□□ -1.57
COL3A1P02461 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
COL3A1P02461 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.25□□□□□ -1.57
COL3A1P02461 U6.42-201ENST00000618440 107 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 RNU6-368P-201ENST00000620928 107 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 RNU6-538P-201ENST00000622329 107 ntBASIC5.25□□□□□ -1.57
COL3A1P02461 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL3A1P02461 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.25□□□□□ -1.57
COL3A1P02461 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC5.25□□□□□ -1.57
COL3A1P02461 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL3A1P02461 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL3A1P02461 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.24□□□□□ -1.57
COL3A1P02461 MAPK10-320ENST00000641462 6696 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
COL3A1P02461 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.24□□□□□ -1.57
COL3A1P02461 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL3A1P02461 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.24□□□□□ -1.57
COL3A1P02461 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL3A1P02461 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL3A1P02461 Y_RNA.51-201ENST00000362725 102 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 Y_RNA.194-201ENST00000363985 102 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
COL3A1P02461 GSTA8P-201ENST00000404253 637 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 MTCYBP5-201ENST00000423752 1135 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.24□□□□□ -1.57
COL3A1P02461 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL3A1P02461 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.24□□□□□ -1.57
COL3A1P02461 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.24□□□□□ -1.57
COL3A1P02461 AC017037.1-201ENST00000508460 471 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.24□□□□□ -1.57
COL3A1P02461 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL3A1P02461 RNU6-889P-201ENST00000517189 103 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 AC105185.1-201ENST00000518705 535 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.24□□□□□ -1.57
COL3A1P02461 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.24□□□□□ -1.57
COL3A1P02461 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.24□□□□□ -1.57
COL3A1P02461 AC023050.2-201ENST00000544968 387 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.24□□□□□ -1.57
COL3A1P02461 AC006363.1-201ENST00000603806 463 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 AC105129.3-201ENST00000605455 485 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 MIR1264-201ENST00000616374 69 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 AL603755.1-201ENST00000619504 163 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 AC090897.3-201ENST00000636973 1157 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 AL392088.2-201ENST00000637607 285 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.24□□□□□ -1.57
COL3A1P02461 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.24□□□□□ -1.57
COL3A1P02461 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL3A1P02461 AL121839.2-201ENST00000565058 6943 ntBASIC5.24□□□□□ -1.57
COL3A1P02461 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.24□□□□□ -1.57
COL3A1P02461 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL3A1P02461 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
COL3A1P02461 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL3A1P02461 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.23□□□□□ -1.57
COL3A1P02461 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL3A1P02461 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL3A1P02461 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL3A1P02461 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL3A1P02461 RNU6-304P-201ENST00000364855 107 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 AC234772.1-201ENST00000377927 937 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 AC007066.1-201ENST00000392902 381 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL3A1P02461 AL606495.1-201ENST00000422100 813 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 OSTCP5-201ENST00000425293 453 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.23□□□□□ -1.57
COL3A1P02461 C8orf59P1-201ENST00000429930 303 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 UBE2D3P4-201ENST00000441973 436 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 RPL12P26-201ENST00000452430 487 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.23□□□□□ -1.57
COL3A1P02461 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.23□□□□□ -1.57
COL3A1P02461 OR9M1P-201ENST00000459641 921 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 AC008379.1-201ENST00000463655 464 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.23□□□□□ -1.57
COL3A1P02461 AC091959.2-201ENST00000477363 321 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 RPF2P2-201ENST00000504693 896 ntBASIC5.23□□□□□ -1.57
COL3A1P02461 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.23□□□□□ -1.57
COL3A1P02461 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
COL3A1P02461 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.23□□□□□ -1.57
COL3A1P02461 IGKV2-23-201ENST00000518729 323 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms