Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC133473.1-201ENST00000455173 299 ntBASIC4.09□□□□□ -1.75
MSH4O15457 DNAJC19P1-201ENST00000455312 319 ntBASIC4.09□□□□□ -1.75
MSH4O15457 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.09□□□□□ -1.75
MSH4O15457 OR52A4P-202ENST00000481634 799 ntBASIC4.09□□□□□ -1.75
MSH4O15457 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MSH4O15457 SNORA70.18-201ENST00000516696 98 ntBASIC4.09□□□□□ -1.75
MSH4O15457 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.09□□□□□ -1.75
MSH4O15457 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.09□□□□□ -1.75
MSH4O15457 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.09□□□□□ -1.75
MSH4O15457 MIR3922-201ENST00000585192 84 ntBASIC4.09□□□□□ -1.75
MSH4O15457 AC005242.1-201ENST00000585658 438 ntBASIC4.09□□□□□ -1.75
MSH4O15457 AC020914.6-201ENST00000594327 272 ntBASIC4.09□□□□□ -1.75
MSH4O15457 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.09□□□□□ -1.75
MSH4O15457 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.09□□□□□ -1.75
MSH4O15457 AC139769.3-201ENST00000618383 175 ntBASIC4.09□□□□□ -1.75
MSH4O15457 AL732618.1-201ENST00000623251 301 ntBASIC4.09□□□□□ -1.75
MSH4O15457 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MSH4O15457 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.09□□□□□ -1.75
MSH4O15457 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.09□□□□□ -1.75
MSH4O15457 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.76
MSH4O15457 NCAPGP1-201ENST00000505112 1814 ntBASIC4.09□□□□□ -1.76
MSH4O15457 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.09□□□□□ -1.76
MSH4O15457 LINC00561-201ENST00000565815 2738 ntBASIC4.08□□□□□ -1.76
MSH4O15457 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
MSH4O15457 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MSH4O15457 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
MSH4O15457 AC007656.2-201ENST00000624902 4547 ntBASIC4.08□□□□□ -1.76
MSH4O15457 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MSH4O15457 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MSH4O15457 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
MSH4O15457 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
MSH4O15457 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MSH4O15457 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.08□□□□□ -1.76
MSH4O15457 SNORD115-48-201ENST00000364764 76 ntBASIC4.08□□□□□ -1.76
MSH4O15457 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
MSH4O15457 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
MSH4O15457 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.08□□□□□ -1.76
MSH4O15457 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.08□□□□□ -1.76
MSH4O15457 SDCBPP2-201ENST00000424643 885 ntBASIC4.08□□□□□ -1.76
MSH4O15457 RPL12P46-201ENST00000436610 195 ntBASIC4.08□□□□□ -1.76
MSH4O15457 AC010655.1-201ENST00000449336 292 ntBASIC4.08□□□□□ -1.76
MSH4O15457 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.08□□□□□ -1.76
MSH4O15457 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.08□□□□□ -1.76
MSH4O15457 HMGN1P15-201ENST00000513870 295 ntBASIC4.08□□□□□ -1.76
MSH4O15457 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.08□□□□□ -1.76
MSH4O15457 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
MSH4O15457 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.08□□□□□ -1.76
MSH4O15457 HMGB3P26-201ENST00000560051 582 ntBASIC4.08□□□□□ -1.76
MSH4O15457 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.08□□□□□ -1.76
MSH4O15457 AL133457.1-201ENST00000564251 987 ntBASIC4.08□□□□□ -1.76
MSH4O15457 MIR548Y-201ENST00000582739 110 ntBASIC4.08□□□□□ -1.76
MSH4O15457 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.08□□□□□ -1.76
MSH4O15457 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.08□□□□□ -1.76
MSH4O15457 AL096803.3-201ENST00000609032 532 ntBASIC4.08□□□□□ -1.76
MSH4O15457 AC110792.4-201ENST00000609843 298 ntBASIC4.08□□□□□ -1.76
MSH4O15457 AC055764.2-201ENST00000610089 670 ntBASIC4.08□□□□□ -1.76
MSH4O15457 AC003001.2-201ENST00000616294 831 ntBASIC4.08□□□□□ -1.76
MSH4O15457 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.08□□□□□ -1.76
MSH4O15457 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.08□□□□□ -1.76
MSH4O15457 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
MSH4O15457 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
MSH4O15457 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
MSH4O15457 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.07□□□□□ -1.76
MSH4O15457 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.07□□□□□ -1.76
MSH4O15457 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.07□□□□□ -1.76
MSH4O15457 SNORA71.3-201ENST00000362582 128 ntBASIC4.07□□□□□ -1.76
MSH4O15457 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MSH4O15457 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
MSH4O15457 RNU6-452P-201ENST00000384406 107 ntBASIC4.07□□□□□ -1.76
MSH4O15457 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.07□□□□□ -1.76
MSH4O15457 DBIP2-201ENST00000419076 262 ntBASIC4.07□□□□□ -1.76
MSH4O15457 AC073464.3-201ENST00000422564 712 ntBASIC4.07□□□□□ -1.76
MSH4O15457 IPMKP1-201ENST00000425988 855 ntBASIC4.07□□□□□ -1.76
MSH4O15457 MOB1AP1-201ENST00000430903 535 ntBASIC4.07□□□□□ -1.76
MSH4O15457 ZFAND6P1-201ENST00000434138 605 ntBASIC4.07□□□□□ -1.76
MSH4O15457 RPS20P1-201ENST00000434853 354 ntBASIC4.07□□□□□ -1.76
MSH4O15457 HSPD1P21-201ENST00000436541 245 ntBASIC4.07□□□□□ -1.76
MSH4O15457 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.07□□□□□ -1.76
MSH4O15457 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.07□□□□□ -1.76
MSH4O15457 RN7SL93P-201ENST00000463035 293 ntBASIC4.07□□□□□ -1.76
MSH4O15457 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
MSH4O15457 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.07□□□□□ -1.76
MSH4O15457 RN7SKP13-201ENST00000515933 244 ntBASIC4.07□□□□□ -1.76
MSH4O15457 RNA5SP143-201ENST00000516936 115 ntBASIC4.07□□□□□ -1.76
MSH4O15457 AC010591.1-201ENST00000603941 649 ntBASIC4.07□□□□□ -1.76
MSH4O15457 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.07□□□□□ -1.76
MSH4O15457 AL356121.2-201ENST00000624715 780 ntBASIC4.07□□□□□ -1.76
MSH4O15457 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.07□□□□□ -1.76
MSH4O15457 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
MSH4O15457 AC090337.1-201ENST00000579651 2074 ntBASIC4.07□□□□□ -1.76
MSH4O15457 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.07□□□□□ -1.76
MSH4O15457 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.06□□□□□ -1.76
MSH4O15457 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MSH4O15457 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
MSH4O15457 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MSH4O15457 AC096656.1-201ENST00000623826 1364 ntBASIC4.06□□□□□ -1.76
MSH4O15457 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MSH4O15457 SNORD51.1-201ENST00000365405 77 ntBASIC4.06□□□□□ -1.76
MSH4O15457 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.06□□□□□ -1.76
MSH4O15457 AC019155.1-201ENST00000382242 574 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms