Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL356489.2-201ENST00000566968 3528 ntBASIC4.36□□□□□ -1.71
O00370 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
O00370 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
O00370 AL139811.1-201ENST00000424779 2299 ntBASIC4.35□□□□□ -1.71
O00370 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
O00370 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
O00370 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
O00370 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.35□□□□□ -1.71
O00370 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
O00370 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 AL121657.1-201ENST00000327215 531 ntBASIC4.35□□□□□ -1.71
O00370 RNA5SP502-201ENST00000362694 119 ntBASIC4.35□□□□□ -1.71
O00370 RNU1-87P-201ENST00000363727 170 ntBASIC4.35□□□□□ -1.71
O00370 SNORA70.2-201ENST00000364506 135 ntBASIC4.35□□□□□ -1.71
O00370 RNU1-89P-201ENST00000384592 164 ntBASIC4.35□□□□□ -1.71
O00370 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
O00370 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.35□□□□□ -1.71
O00370 PGBD4P8-201ENST00000412993 562 ntBASIC4.35□□□□□ -1.71
O00370 AC004022.2-201ENST00000413824 193 ntBASIC4.35□□□□□ -1.71
O00370 SAGE2P-201ENST00000420011 2126 ntBASIC4.35□□□□□ -1.71
O00370 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.35□□□□□ -1.71
O00370 AC093422.3-201ENST00000428506 305 ntBASIC4.35□□□□□ -1.71
O00370 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.35□□□□□ -1.71
O00370 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.35□□□□□ -1.71
O00370 AL645939.1-201ENST00000453429 797 ntBASIC4.35□□□□□ -1.71
O00370 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.35□□□□□ -1.71
O00370 RPL7P1-201ENST00000468161 747 ntBASIC4.35□□□□□ -1.71
O00370 RPL7P9-201ENST00000468715 747 ntBASIC4.35□□□□□ -1.71
O00370 RPS17P11-201ENST00000474297 293 ntBASIC4.35□□□□□ -1.71
O00370 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.35□□□□□ -1.71
O00370 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
O00370 AC146944.2-203ENST00000502493 354 ntBASIC4.35□□□□□ -1.71
O00370 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.35□□□□□ -1.71
O00370 AC109458.1-201ENST00000508858 316 ntBASIC4.35□□□□□ -1.71
O00370 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 AC139495.1-202ENST00000513164 354 ntBASIC4.35□□□□□ -1.71
O00370 MTATP6P9-201ENST00000515039 680 ntBASIC4.35□□□□□ -1.71
O00370 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.35□□□□□ -1.71
O00370 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.35□□□□□ -1.71
O00370 MTND1P6-201ENST00000523621 946 ntBASIC4.35□□□□□ -1.71
O00370 AP003066.2-201ENST00000529375 555 ntBASIC4.35□□□□□ -1.71
O00370 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.35□□□□□ -1.71
O00370 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.35□□□□□ -1.71
O00370 YWHAZP1-201ENST00000556286 722 ntBASIC4.35□□□□□ -1.71
O00370 RPL23AP87-202ENST00000573039 466 ntBASIC4.35□□□□□ -1.71
O00370 AC124283.4-201ENST00000581815 456 ntBASIC4.35□□□□□ -1.71
O00370 AC008507.2-201ENST00000588402 1176 ntBASIC4.35□□□□□ -1.71
O00370 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.35□□□□□ -1.71
O00370 AC011492.1-201ENST00000600023 315 ntBASIC4.35□□□□□ -1.71
O00370 AP000240.1-201ENST00000609910 452 ntBASIC4.35□□□□□ -1.71
O00370 AC022960.3-201ENST00000619794 441 ntBASIC4.35□□□□□ -1.71
O00370 AC090506.2-201ENST00000624521 419 ntBASIC4.35□□□□□ -1.71
O00370 MIR492-201ENST00000638676 116 ntBASIC4.35□□□□□ -1.71
O00370 AC013437.2-201ENST00000639587 677 ntBASIC4.35□□□□□ -1.71
O00370 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.35□□□□□ -1.71
O00370 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.35□□□□□ -1.71
O00370 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 CASC19-261ENST00000641853 1638 ntBASIC4.35□□□□□ -1.71
O00370 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 AC134882.1-201ENST00000603738 1676 ntBASIC4.35□□□□□ -1.71
O00370 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
O00370 AL136964.1-201ENST00000622038 2990 ntBASIC4.35□□□□□ -1.71
O00370 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.35□□□□□ -1.71
O00370 MARK2P15-201ENST00000432204 2186 ntBASIC4.34□□□□□ -1.71
O00370 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
O00370 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.34□□□□□ -1.71
O00370 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
O00370 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
O00370 OR11H4-201ENST00000315409 1082 ntBASIC4.34□□□□□ -1.71
O00370 RN7SKP44-201ENST00000363602 316 ntBASIC4.34□□□□□ -1.71
O00370 SNORA70C-201ENST00000384538 135 ntBASIC4.34□□□□□ -1.71
O00370 HMGB3P19-201ENST00000403971 560 ntBASIC4.34□□□□□ -1.71
O00370 MIR1303-201ENST00000408625 86 ntBASIC4.34□□□□□ -1.71
O00370 RN7SKP56-201ENST00000410513 331 ntBASIC4.34□□□□□ -1.71
O00370 TPT1P2-201ENST00000413105 503 ntBASIC4.34□□□□□ -1.71
O00370 AC004987.3-201ENST00000413879 771 ntBASIC4.34□□□□□ -1.71
O00370 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.34□□□□□ -1.71
O00370 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.34□□□□□ -1.71
O00370 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.34□□□□□ -1.71
O00370 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
O00370 ETF1P3-201ENST00000430422 1160 ntBASIC4.34□□□□□ -1.71
O00370 AL358472.1-201ENST00000431295 329 ntBASIC4.34□□□□□ -1.71
O00370 RPS6P12-201ENST00000432491 726 ntBASIC4.34□□□□□ -1.71
O00370 RPL7P28-201ENST00000437739 740 ntBASIC4.34□□□□□ -1.71
O00370 ARL5AP2-201ENST00000444698 533 ntBASIC4.34□□□□□ -1.71
O00370 AL035407.2-201ENST00000454090 378 ntBASIC4.34□□□□□ -1.71
O00370 MTATP6P14-201ENST00000455189 673 ntBASIC4.34□□□□□ -1.71
O00370 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.34□□□□□ -1.71
O00370 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.34□□□□□ -1.71
O00370 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.34□□□□□ -1.71
O00370 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.34□□□□□ -1.71
O00370 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms